Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01825 ATGGAGAGCACTGGTTTGTGTGTATGGGTTGTTGTACTCTTGTTGTTGGGGTGTGTCCTTTCCTCGGAATCCAAGTATATAAGGTACAACACAACCTCAACCATTGTTCCTGGCAAGCTCAACGTTCACCTGGTCCCTCACTCTCACGATGATGTTGGATGGTTGAAGACCATTGACCAATACTATGTCGGTTCCAACAATTCAATTCAGGGAGCCTGCGTTCAAAACGTGCTTGATTCCCTGGTACCTGCTTTGCTGGCAGACAAGAATCGCAAGTTCATATATGTTGAACAGGCATTTTTCCAGCGATGGTGGACGGAGCAAAGTGATGCTATCCAGAATATAGTCAAGAAACTGGTCAACTCTGGTCAATTGGAGTTCATAAATGGTGGTTTTTGTATGCATGATGAGGCTGCTGCTCATTACATTGACATGATTGATCAGACAACTCTTGGACATCAATTTATCAAAGAAGAATTTGGAGTGACTCCGAGAATAGGGTGGCAGATTGATCCATTTGGACATTCTGCTGTGCAGGCATACTTGTTGGGGGCAGAGGTTGGATTTGACTCTCTATTCTTTGCACGGATTGACTACCAAGACAGAGCTAAGAGAAAAGATAAAAAAACTCTTGAAGTTGTGTGGCGGGGCTCCAAGAGCCTTGGTTCATCATCACAGATATTTTCTGGTGCGTTCCCTGAGAATTATGAACCTCCCAGTAATTTCTACTACGAAGTAAACGACGATTCTCCCATTGTTCAGGATGATGTCAATTTATTTGATTACAATGTCCCTGAAAGAGTAAACGAGTTTGTCGCAGCCGCAATATCACAGGCCAATATTACGCGCACAAATCATATAATGTGGACAATGGGGACAGATTTCAAGTACCAGTATGCACAAAGCTGGTTTCGGCAATTGGACAAGTTTATTCACTATGTTAATCAAGATGGTCGTGTTCATGCCTTATACTCGACTCCATCAATATATACTGATGCAAAACATGCTGCCAATGAGGCCTGGCCAATCAAGACTGATGACTACTTTCCGTATGCAGATCGTGTAAATGCCTATTGGACAGGGTATTTTACAAGCAGGCCAGCAATCAAAGGTTATGTCAGATTGATGAGTGGCTACTACTTGGCAGCAAGGCAGTTGGAATATTTTAAAGGGAAGAGTGCCTTAGGTCCCAAAACTGACTCTTTGGCTGAAGCTTTGGCTATTGCTCAACACCATGATGCGGTAACTGGTACAGAAAAGCAGCATGTTGCTAATGATTATGCTAAACGACTTTCAATAGGTTACACGGAGGCTGAGAAAGTTGTTGCAGTATCACTTGCTTGTTTGACAGAGGGAGCAAACAAAACAGGTTGTAAGAACCCACAGATTAAATTTCAACAGTGTCCACTTCTGAACATAAGTTACTGTCCTGCATCGGAAGTTGATTTCTCAAATGGGAAAAACTTGGTAGTTGTTGTTTACAATCCTCTGGGATGGAAAAGAGAGGATATCATAAGGATTCCTGTTGTCAATGAAAAGGTTGCTGTTCGGGATTCCAGTGGGAAAAAAATCCAATCACAGCTGGTGCCAATACTTGATGCTTTTCTTGATTTAAGAAACTACCATACTGTGGCATACTTGGGAGTGTCTCCAACTGTAAAACCCAAATACTGGCTTGCCTTTTCAGCAACTGTTCCTCCACTTGGTTTTAGCACTTACCATGTATCCTATTCCAAAAAAGACGCTACTATTTCAGATAGAGATACAGCTTACCAATCATTGAATAAGAGTGATACAATTACAGTGGGCATAAAAGACTTGAAACTAACTTATTCTGTGAAGGAAGGGAAACTTACTCGATATATCAACAACAGAAGCAAGGTCAAAGAATCTCTAGAGCAGGCATATAAATTTTACACAGGGTATGGAAATGATGGAACAGAAACTGCTCAGGCGTCTGGAGCATATATTTTTCGTCCTAATGGTTCATCATCTCCCATCAGATCCAACGGGAAGTCTCCTCTCACAGTTTTTCGGGGACCAATTGTGCATGAAGTGCATCAGAAGATTAGTCCATGGATATACCAGAGCACTAGACTGTTCAAGGGGAAAGAACATGCTGAAGTTGAGTTTACTGTTGGACCTATACCCATTGATGATGGAGTTGGCAAAGAGATTGCAACTGAGATCAAAACAAATCTGGCAAGCAACAAAACCTTCTATACTGATTCCAATGGACGTGATTTCATTGAACGTGTTCGAGACTATAGAAAAGACTGGAACTTGGAAGTAAATCAACCTGTTGCTGGAAATTATTACCCTATCAACCTTGGGATTTACCTGAAAGATAAAAGCAAAGAGTTCTCTATATTGGTAGATAGAGCTGTGGGGGGCTCCAGCATCAAAGATGGGCAATTGGAGCTAATGGTTCATAGGAGGTTACTTGAGGATGATTCCAGAGGTGTTGCAGAGGCACTGAATGAAACAGTTTGCGTCCATGATAAGTGCACTGGGTTAACTGTGCTAGGGAAGTACTATTTCAGAATTGATCCTGTAGGAGAGGGTGCTAGATGGCGTCGATCATTTGGTCAGGAGATATACTCACCCTTGCTTTTAGCCTTCACAGAGAGTGAAGGTCACTGGGGAGATTCTCATGTCACAACCTTTTCGGGAATAGATTCCTCATACAACTTACCAGATAACGTTGCAATAATAACTCTCCAGGATCTGGGTGATGGAAAAGTTCTCCTTCGGCTGGCACACTTATACGAGATTGACGAGGACAAGTATCTTTCAGTTAAGGCAACTGTAGAGCTTAAAAAGGTGTTTTCGGACAAACAGATAAACAAAACAACTGAAGTGAGCTTATCAGCAAACCAAGAAAGAGCAGAAATGGAGAGGAAGAGATTGGTTTGGCAAGTTAAAGGGTCACCTCCAGAACCTAAGGTGAGGAGGGGAGGACCAGTAGATCCAGAAAATCTAATTGTAGAACTTGCTCCCATGGAAATACGGACTTTTGTTATCAGTTTTAGGCATTAA 3039 0.4205 MESTGLCVWVVVLLLLGCVLSSESKYIRYNTTSTIVPGKLNVHLVPHSHDDVGWLKTIDQYYVGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWTEQSDAIQNIVKKLVNSGQLEFINGGFCMHDEAAAHYIDMIDQTTLGHQFIKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFARIDYQDRAKRKDKKTLEVVWRGSKSLGSSSQIFSGAFPENYEPPSNFYYEVNDDSPIVQDDVNLFDYNVPERVNEFVAAAISQANITRTNHIMWTMGTDFKYQYAQSWFRQLDKFIHYVNQDGRVHALYSTPSIYTDAKHAANEAWPIKTDDYFPYADRVNAYWTGYFTSRPAIKGYVRLMSGYYLAARQLEYFKGKSALGPKTDSLAEALAIAQHHDAVTGTEKQHVANDYAKRLSIGYTEAEKVVAVSLACLTEGANKTGCKNPQIKFQQCPLLNISYCPASEVDFSNGKNLVVVVYNPLGWKREDIIRIPVVNEKVAVRDSSGKKIQSQLVPILDAFLDLRNYHTVAYLGVSPTVKPKYWLAFSATVPPLGFSTYHVSYSKKDATISDRDTAYQSLNKSDTITVGIKDLKLTYSVKEGKLTRYINNRSKVKESLEQAYKFYTGYGNDGTETAQASGAYIFRPNGSSSPIRSNGKSPLTVFRGPIVHEVHQKISPWIYQSTRLFKGKEHAEVEFTVGPIPIDDGVGKEIATEIKTNLASNKTFYTDSNGRDFIERVRDYRKDWNLEVNQPVAGNYYPINLGIYLKDKSKEFSILVDRAVGGSSIKDGQLELMVHRRLLEDDSRGVAEALNETVCVHDKCTGLTVLGKYYFRIDPVGEGARWRRSFGQEIYSPLLLAFTESEGHWGDSHVTTFSGIDSSYNLPDNVAIITLQDLGDGKVLLRLAHLYEIDEDKYLSVKATVELKKVFSDKQINKTTEVSLSANQERAEMERKRLVWQVKGSPPEPKVRRGGPVDPENLIVELAPMEIRTFVISFRH 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01825 1012 FunFam Alpha-mannosidase 477 601 - -
Pumo10g01825 1012 SUPERFAMILY Families 57/38 glycoside transferase middle domain 356 450 IPR028995 -
Pumo10g01825 1012 FunFam Alpha-mannosidase 40 320 - -
Pumo10g01825 1012 FunFam Alpha-mannosidase 319 398 - -
Pumo10g01825 1012 Gene3D - 477 602 IPR013780 -
Pumo10g01825 1012 Gene3D - 603 868 - -
Pumo10g01825 1012 FunFam Alpha-mannosidase 399 455 - -
Pumo10g01825 1012 FunFam Alpha-mannosidase 887 1012 - -
Pumo10g01825 1012 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 901 1006 IPR041147 -
Pumo10g01825 1012 Gene3D Glycoside hydrolase family 38, central domain 400 455 IPR037094 GO:0004559|GO:0006013
Pumo10g01825 1012 Pfam Alpha mannosidase middle domain 357 449 IPR015341 GO:0004559|GO:0006013
Pumo10g01825 1012 Gene3D Glycoside hydrolase 38, N terminal domain 40 320 IPR027291 -
Pumo10g01825 1012 Gene3D - 886 1012 - -
Pumo10g01825 1012 SUPERFAMILY Glycoside hydrolase/deacetylase 29 353 IPR011330 GO:0005975
Pumo10g01825 1012 CDD GH38N_AMII_LAM_like 40 316 - -
Pumo10g01825 1012 Gene3D Glycoside hydrolase family 38, central domain 321 399 IPR037094 GO:0004559|GO:0006013
Pumo10g01825 1012 Pfam Glycosyl hydrolases family 38 C-terminal domain 607 820 IPR011682 GO:0004559|GO:0006013
Pumo10g01825 1012 FunFam Alpha-mannosidase 601 868 - -
Pumo10g01825 1012 Pfam Glycosyl hydrolases family 38 N-terminal domain 41 352 IPR000602 GO:0004559|GO:0006013
Pumo10g01825 1012 SMART Alpha_mann_mid_2 357 431 IPR015341 GO:0004559|GO:0006013
Pumo10g01825 1012 SUPERFAMILY Galactose mutarotase-like 462 1010 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pumo10g01825 1012 PANTHER ALPHA-MANNOSIDASE 13 1011 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01825 Pumo-Chr10 24016762 24025568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01825 1 924 Glycoside Hydrolase AT5G13980 69.892 0.0 1355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01825 K01191 - gmx:100798150 1947.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01825 10 24016762 24025568 Pumo10g01825 10 24016762 24025568 ECH