Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01772 ATGAATTCTTTCCGCGGCTCCCAACACCGCACCACCAAACCCAGTCCATCCCGAATCCCTCGCCAACCCGCTTCAACCACCTCCGACCACCACCACGACCCCATGGCACCCCCCGCCGCGCCGCCCGCCTTCCGCTTCCGCTCCCTCTCCAGCTGCGCCCACAACCGCCCCTCCCCCGCCTCCTCCTCCGCCGTGAAGCGATCCGCCTCGGCCAGGTTCTCGCGCCAGCACACCTCCACGCGCAACGAGGTCATGCTGAACGACATCGTCGGGAACGGAGTCTCCGGAATCCTCTACAAGTGGGTGAACTACGGGCGCGGGTGGCGCCCCCGCTGGTTCGTCCTGCACGACGGCGTTTTGTCCTACTACAAGATCCACGGCCCCGACAAGCTCGTTCTCAACCGCGACGTCGAGACCGGCGCCATGGTCATCGGCGAGGAGTCGCTCCGCCGCATCAACAGCCACCGCCATTGCCCCTCCCGCAACCGTAAGCCAGTCAGCGAAATCCACCTCATGGTGTGTTCGGTGCGAGAGAACAGGTCAGATGAGAGGAGGTTTTCTGTGTGTACTGGGACGAAGAAGAGGTTGCATTTGAGGGCGGAGAGCAGGGAAGATAGAGCGAAGTGGGTGGAGGCAATGATGGCGGTCAAGGACATGTTTCCGCGCTTGCCCAATGCAGAGGCTATGTCACCCGTCGCATCCGTAGTAATTTCTACCGAGAAGTTGAAAGATCGCCTTTTACTGGAGGGTGTGACTGAGACTGCTATTAGGGAATGTGAGGAAATCATGAAGTCCGAGTTCTCCCAATTGCAGAAGCATATTGTTGCCCTCAAGCAGAAGCAGGTGCTACTAATGGACACGCTGCGCCATTTAGAGGCAGAGAAGGTTGACTTGGAGAACACACTTATTGAAGACCAAAGGCAATCAAAGGATGAAACAGATCCCTATCTATCAACGCAAGAAAAGTATAGTGAGGGAAGTGGTGGTGATTCTTCTGATGAGAACGATAGGCATGATCCCTCAGACGATGAAGACGATGCATTCTTCGATACATGTGATGATGTTCTATCAACAGGCTCTGACCACCCGAGACCCTGCCATGATTCTGAATGTGAGGAGACTAGTCCAAATGGTGATGAAAAATCACCCATTGGATCTGTTGGATTTAACTATCCTCAAATCAAGCGACGAAAGAAGTTGCCTGATCCTGTTGAGAAAGAGAGCAGCATCAGTCTATGGTCAATCATAAAAGATAACATTGGGAAGGATCTTACAAAAGTTTGTCTTCCAGTTTACTTTAATGAGCCTCTCTCCTCACTGCAGAAATGTTTTGAAGATCTTGAGTACTCTTACCTTCTAGACCAAGCATATGAATGGGGTAAAATGGGTGACAGTCTAAAGAGAATGCTGCATGTGGCTGCATTTGCTGTTTCGGGGTATGCTAGCACCAATGGTAGAAGTTGCAAACCATTTAATCCACTGTTGGGTGAGACATATGAAGCAGAGTATCCAGACAAAGGCATTCGCTTTATCTCTGAGAAGGTCAGTCATCACCCCATGATTGTTGCATGCCATTGTGAGGGCAGTGGCTGGAAATTTTGGGGTGACAGCAATTTAAAAAGTAAATTTTGGGGTCGTTCAATCCAGCTTGATCCCGTTGGTTTATTGACCGTAGAGTTTGATGATGGAGAAGTCTTTCATTGGAGCAAGGTAACCACATCCATTTACAACCTCATTTTAGGAAAACTCTACTGTGACCATTATGGTACAATGAGGGTAGAGGTAGAGGGTAACCGTGAGTATTTATGTAAGATCAAATTCAAGGAGCAGTCAATCATTGATAGAAACCCTCACCAGATTCACGGCGTAGTGGAAGATAAGAAAGGTAAAACTGCGGCAACTCTATTTGGGAAGTGGGATGAGAGCTTGCATTACGTAATTGGAGGGAATTCTGGGAAAGGAAAAGGGTCCAATGTGTCATCAAAACCACATCTTTTGTGGAAGCGGAGCCAAACACCGGAGTACCAGACAAGATATAACTTCACACAATTTGCTATTACACTAAATGAAATCACACCTGGACTAAAGGAGAAGTTGCCACCGACAGATTCAAGGCTAAGACCTGATCAAAGGTGTTTGGAGAATGGACAGCATGAAATGGCCAATTCTGAAAAGTTGCGGCTGGAACAAAGACAGCGGCAGGCACGAAAGATGCAAGAGAAGGGTTGGAAACCAAGGTGGTTTGCCAAGGAAAAAGGCAGCAACACTTACCGTTATGTTGGAGGGTACTGGGAGACCAGGGAAAAGGGGAACTGGGAATCTTGTCCTGACATTTTTGGCCAAGTCTCAACCGATACTTTTTTTAACCCAACTCCATAA 2379 0.4931 MNSFRGSQHRTTKPSPSRIPRQPASTTSDHHHDPMAPPAAPPAFRFRSLSSCAHNRPSPASSSAVKRSASARFSRQHTSTRNEVMLNDIVGNGVSGILYKWVNYGRGWRPRWFVLHDGVLSYYKIHGPDKLVLNRDVETGAMVIGEESLRRINSHRHCPSRNRKPVSEIHLMVCSVRENRSDERRFSVCTGTKKRLHLRAESREDRAKWVEAMMAVKDMFPRLPNAEAMSPVASVVISTEKLKDRLLLEGVTETAIRECEEIMKSEFSQLQKHIVALKQKQVLLMDTLRHLEAEKVDLENTLIEDQRQSKDETDPYLSTQEKYSEGSGGDSSDENDRHDPSDDEDDAFFDTCDDVLSTGSDHPRPCHDSECEETSPNGDEKSPIGSVGFNYPQIKRRKKLPDPVEKESSISLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDQAYEWGKMGDSLKRMLHVAAFAVSGYASTNGRSCKPFNPLLGETYEAEYPDKGIRFISEKVSHHPMIVACHCEGSGWKFWGDSNLKSKFWGRSIQLDPVGLLTVEFDDGEVFHWSKVTTSIYNLILGKLYCDHYGTMRVEVEGNREYLCKIKFKEQSIIDRNPHQIHGVVEDKKGKTAATLFGKWDESLHYVIGGNSGKGKGSNVSSKPHLLWKRSQTPEYQTRYNFTQFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGQHEMANSEKLRLEQRQRQARKMQEKGWKPRWFAKEKGSNTYRYVGGYWETREKGNWESCPDIFGQVSTDTFFNPTP 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01772 792 MobiDBLite consensus disorder prediction 360 377 - -
Pumo10g01772 792 SMART PH_update 92 220 IPR001849 -
Pumo10g01772 792 Coils Coil 721 741 - -
Pumo10g01772 792 FunFam Oxysterol-binding protein-related protein 2A 710 781 - -
Pumo10g01772 792 Gene3D - 497 679 - -
Pumo10g01772 792 Gene3D - 710 775 - -
Pumo10g01772 792 SUPERFAMILY PH domain-like 95 227 - -
Pumo10g01772 792 FunFam oxysterol-binding protein-related protein 1D isoform X1 497 671 - -
Pumo10g01772 792 Pfam Oxysterol-binding protein 411 768 IPR000648 GO:0008289
Pumo10g01772 792 MobiDBLite consensus disorder prediction 51 78 - -
Pumo10g01772 792 MobiDBLite consensus disorder prediction 1 78 - -
Pumo10g01772 792 MobiDBLite consensus disorder prediction 1 24 - -
Pumo10g01772 792 MobiDBLite consensus disorder prediction 337 351 - -
Pumo10g01772 792 Coils Coil 288 308 - -
Pumo10g01772 792 Gene3D - 92 220 IPR011993 -
Pumo10g01772 792 MobiDBLite consensus disorder prediction 303 318 - -
Pumo10g01772 792 Pfam Pleckstrin homology domain 99 213 - -
Pumo10g01772 792 MobiDBLite consensus disorder prediction 303 389 - -
Pumo10g01772 792 ProSiteProfiles PH domain profile. 91 218 IPR001849 -
Pumo10g01772 792 CDD PH_ORP_plant 94 226 - -
Pumo10g01772 792 SUPERFAMILY Oxysterol-binding protein-like 406 782 IPR037239 -
Pumo10g01772 792 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 93 767 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01772 Pumo-Chr10 23360344 23368405 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01772 K20456 - gmx:100807703 1392.48