Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01771 ATGCAAGAGACGCTGCTCACTCTCTCCGAAGAGGACACCAGCAACAACAGCAAAGACATCGAGCTGCTCGTGGTGCCGGCGGCATCGTGCCGGCGGACGGCGAGGCGCGTGTCTCCCGGCGCGGTGGAGAAGGCGCTCCCGAACGGCGACATCTACAGCGGAAGCCTCTCCGGTAACGTCCCTCACGGGAGTGGGAAATACCTCTGGTCGGACGGGTGCATGTACGAGGGAGAGTGGAAGAAAGGCAAGGCGTGGGGCAAGGGCCGCTTCTCGTGGCCCTCCGGCGCCACCTACGAGGGCGAGTTCACCGCCGGGAGGATGCACGGGCACGGCACCTTCGTCGGCGTCGACGGCGACACCTACCGCGGCATGTGGCTCTCGGACAGAAAACACGGCTTGGGCGAGAAGCACTACGCGAACGGCGACGTCTACGAAGGGTTGTGGAGGTGCAACTTGCAGGAAGGGGAGGGGAGGTACACGTGGCGAAACGGGAACGAGTACGTTGGGGAGTGGAAGGGCGGAGCTATCTCTGGTAAAGGCGTGTTGGTGTGGAAGAACGGGAACCGTTACGAGGGGTGTTGGGAGAACGGGGTTCCGAAGGGGAGAGGGGTGTTTACATGGCGCGATGGGAGCACCTCCTCCGGGAATTGGGGGAAGGAGTTTGTGAATGAGAAAAGAGTGTCGGTGGATGGGTGTAGTAATAACAACAAGAGTGTGAGTTTTCCCAGGATTTGCATCTGGGAGCTTGATGGTGAGGCTGGGGATATCACTTGTGATATTGTGGAGGCGTCTATGATTTATGGTGGTGGTGGTGGAGGGTGTGAGAGTGATGTGCACTTGCAGAGGAGTCCTTGTGGTTCTGTTGATGGGGATGTTAAGAAGCCTGGTCATACTGTTTCTAAAGGGCATAAGAATTATGATTTGATGCTTAATCTTCAACTGGGTATTAGATACTCTGTTGGGAAGCATGCTTCGGTTTTGCGAGAGCTTAGGCCAGGGGATTTTGATCCCAAGGAGAAGTTCTGGACGAGGTTTCCTCCAGAAGGGTCTAAGTTTACACCTCCACACCAGTCTGTGGATTTCAGGTGGAAAGATTACTGTCCTGTGGTGTTCAGACATCTAAGGGAATTATTTGGGATAGATCCTGCGGATTACATGCTTGCTATTTGTGGCAATGACACACTTAGGGAGATGTCTTCTCCTGGCAAAAGTGGAAGCTTCTTTTACCTCACTCAAGATGACCGGTTCATTATCAAAACCTTGAAGAAGTCGGAAGTCAAGGTGCTCATCAGGATGCTTCCAAGTTACTATCAACATGTGTGTCAGTACAAGAATTCGCTCGTAACAAAATTCCTGGGGGTTCATTGTGTCAAACCTATTGGAGGTCAGAAGACTCGGTTTATTGTGATGGGCAATGTATTTTGTTCGGAGTATCGGATCCATAAGCGGTTTGACCTCAAAGGTTCTTCTCATGGTCGTACAACTGATAAACCCCGGGAGGAAATTGACGAGACCACCACTCTTAAAGACCTTGATCTTTGTTTTGTCTTCCGCCTGGAACAGTCTTGGTTTCAAGAGCTTAAATGGCAACTTGACAGAGACTGTGAATTCCTGGAAGCAGAGGGAATAATGGATTACAGTTTTTTGATTGGCCTTCATTTTCGTAATGATAGCTCAGTTGATGAAGTAAAGAGTTTACCAGACGAGTTGTGTTCAGGCAAGAGAGACATGCAAAATGATGACATACAGGATATGAAGTGGATACCCATAGGCCGGGAACCTCTAATTCGGCTGGGAACTGAACATGCCTGCCAGAGCTGA 1821 0.5135 MQETLLTLSEEDTSNNSKDIELLVVPAASCRRTARRVSPGAVEKALPNGDIYSGSLSGNVPHGSGKYLWSDGCMYEGEWKKGKAWGKGRFSWPSGATYEGEFTAGRMHGHGTFVGVDGDTYRGMWLSDRKHGLGEKHYANGDVYEGLWRCNLQEGEGRYTWRNGNEYVGEWKGGAISGKGVLVWKNGNRYEGCWENGVPKGRGVFTWRDGSTSSGNWGKEFVNEKRVSVDGCSNNNKSVSFPRICIWELDGEAGDITCDIVEASMIYGGGGGGCESDVHLQRSPCGSVDGDVKKPGHTVSKGHKNYDLMLNLQLGIRYSVGKHASVLRELRPGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFGIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFIIKTLKKSEVKVLIRMLPSYYQHVCQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPREEIDETTTLKDLDLCFVFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRNDSSVDEVKSLPDELCSGKRDMQNDDIQDMKWIPIGREPLIRLGTEHACQS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01771 606 Gene3D - 473 590 - -
Pumo10g01771 606 CDD PIPKc_AtPIP5K_like 305 563 - -
Pumo10g01771 606 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 291 472 IPR027484 -
Pumo10g01771 606 SMART PIPK_2 331 570 IPR002498 GO:0016307|GO:0046488
Pumo10g01771 606 Pfam MORN repeat 52 74 IPR003409 -
Pumo10g01771 606 Pfam MORN repeat 75 96 IPR003409 -
Pumo10g01771 606 Pfam MORN repeat 167 189 IPR003409 -
Pumo10g01771 606 Pfam MORN repeat 121 143 IPR003409 -
Pumo10g01771 606 Pfam MORN repeat 144 165 IPR003409 -
Pumo10g01771 606 Pfam MORN repeat 98 120 IPR003409 -
Pumo10g01771 606 Pfam MORN repeat 190 212 IPR003409 -
Pumo10g01771 606 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 390 571 IPR002498 GO:0016307|GO:0046488
Pumo10g01771 606 SUPERFAMILY SAICAR synthase-like 301 564 - -
Pumo10g01771 606 FunFam Phosphatidylinositol 4-phosphate 5-kinase 291 472 - -
Pumo10g01771 606 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 60 567 IPR023610 -
Pumo10g01771 606 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 302 606 IPR002498 GO:0016307|GO:0046488
Pumo10g01771 606 Gene3D - 82 126 - -
Pumo10g01771 606 Gene3D - 127 173 - -
Pumo10g01771 606 Gene3D - 174 244 - -
Pumo10g01771 606 Gene3D - 36 81 - -
Pumo10g01771 606 SMART morn 142 163 IPR003409 -
Pumo10g01771 606 SMART morn 119 140 IPR003409 -
Pumo10g01771 606 SMART morn 188 209 IPR003409 -
Pumo10g01771 606 SMART morn 50 71 IPR003409 -
Pumo10g01771 606 SMART morn 73 94 IPR003409 -
Pumo10g01771 606 SMART morn 165 186 IPR003409 -
Pumo10g01771 606 SMART morn 96 117 IPR003409 -
Pumo10g01771 606 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 47 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01771 Pumo-Chr10 23349470 23354542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01771 33 606 Acyl Lipid Metabolism Gene Families AT1G21980 66.885 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01771 K00889 - gmx:100808235 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01771 10 23349470 23354542 Pumo10g01771 10 23349470 23354542 ECH
Pumo6g00614 6 7754501 7759589 Pumo10g01771 10 23349470 23354542 PCT