Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01759 ATGTGGCGTCGAAGCTTCTCGAAACTCCACCTCAGTCTCAGCGCTTCGGGTTTAGGGTTTCTGACGCGATCGTTCTCCGGCGACGCGGGGAAGAGGTTCGCGGCGCTGTGGGGGAACGGCGATTACGGAAGATTGGGTCTTGGCAACTTGGATTCGCAATGGAAACCCGTCGTTTGCCCCGCGTTCCACGACCAAACGCTAAAAGCCATTGCTTGTGGCGGTGCTCACTCTCTCTTCTTAACAGGAGCCACTTTGTGTTTTTGGAGAGGAGAAAAAGTTGTGCAGATCTCTGCAGGTTATAATCATTCTTGTGCGATTACAGTGGATGGAGAGCTATACATGTGGGGAAAGAATACAAGTGGGCAGCTTGGACTAGGAAAAAGGGCTCCAAACATAGTGCCTTTGCCAACTAAAGTGGAATACTTGAATGGAATCAACATTAAAATGGCAGCTCTGGGTTCAGAGCATTCAGTGGCTATTAGTGATGGTGGAGAGGCCTTTAGTTGGGGAGTTGGAGTGTCTGGTAGACTTGGTCATGGTCATGAGTCAAGCATCCTAGGATTCTTCAAAAGTTACAGTGAGTATACCCCAAGGCTTATAAAGGATCTTGAAGGAATCAAGGTAAAATACGTAGCTGCTGGGTTGCTAAATTCGGCTTGTACTGATGAAAATGGTTCTGTTTTTGTATTTGGTGAAAGAGGAATTGAAAAATTGTGTTTAAAGGAGATGAGCGATGCAACAAAACCATCCTTGATCAGTGAACTTCCATACTCAAAAGAAGTTGCTTGTGGTGGCTACCACATATGTGTCCTGACAAATTCTGGTGAGCTTTATACTTGGGGTTCAAATGAAAATGGCTGCCTTGGTATTGGTTCCTCGGATGTCATTCATCTACCTGAAAAGGTTCAAGGGCCATTCTTGAAGTCTTCCGTTAGCCAGGTTTCTTGTGGTTGGAAGCATACTGCAGCCATTTCTGAAGGAAGAGTGTTCACGTGGGGCTGGGGAGGTTCCAATGGGACGTTCTCTGAAGTTGGACATTCTTCTAGTGGACAATTGGGTCATGGAAGTGATGTGGACTATATAAATCCTACAAGAGTTTGCTTTGGAGAAGACGTGAAAGCATTGCAAGTCTCATGTGGGTTCAATCATACAGGTGCTATACTTGAATATGCATAG 1176 0.4575 MWRRSFSKLHLSLSASGLGFLTRSFSGDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFHDQTLKAIACGGAHSLFLTGATLCFWRGEKVVQISAGYNHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLNGINIKMAALGSEHSVAISDGGEAFSWGVGVSGRLGHGHESSILGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGSVFVFGERGIEKLCLKEMSDATKPSLISELPYSKEVACGGYHICVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILEYA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01759 391 Gene3D - 87 183 IPR009091 -
Pumo10g01759 391 Gene3D - 341 390 IPR009091 -
Pumo10g01759 391 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 37 82 - -
Pumo10g01759 391 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 275 327 IPR000408 -
Pumo10g01759 391 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 225 274 IPR000408 -
Pumo10g01759 391 Pfam Regulator of chromosome condensation (RCC1) repeat 37 80 IPR000408 -
Pumo10g01759 391 Pfam Regulator of chromosome condensation (RCC1) repeat 109 160 IPR000408 -
Pumo10g01759 391 Pfam Regulator of chromosome condensation (RCC1) repeat 274 324 IPR000408 -
Pumo10g01759 391 Pfam Regulator of chromosome condensation (RCC1) repeat 345 387 IPR000408 -
Pumo10g01759 391 Pfam Regulator of chromosome condensation (RCC1) repeat 164 215 IPR000408 -
Pumo10g01759 391 SUPERFAMILY RCC1/BLIP-II 36 388 IPR009091 -
Pumo10g01759 391 Gene3D - 184 340 IPR009091 -
Pumo10g01759 391 Gene3D - 34 86 IPR009091 -
Pumo10g01759 391 PRINTS Chromosome condensation regulator RCC1 signature 261 277 IPR000408 -
Pumo10g01759 391 PRINTS Chromosome condensation regulator RCC1 signature 147 160 IPR000408 -
Pumo10g01759 391 PRINTS Chromosome condensation regulator RCC1 signature 277 291 IPR000408 -
Pumo10g01759 391 PRINTS Chromosome condensation regulator RCC1 signature 111 127 IPR000408 -
Pumo10g01759 391 PRINTS Chromosome condensation regulator RCC1 signature 166 182 IPR000408 -
Pumo10g01759 391 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 110 163 IPR000408 -
Pumo10g01759 391 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 327 390 IPR000408 -
Pumo10g01759 391 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 32 83 IPR000408 -
Pumo10g01759 391 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 164 224 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01759 Pumo-Chr10 23134732 23140631 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01759 - - gmx:100811823 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01759 10 23134732 23140631 Pumo10g01759 10 23134732 23140631 ECH