Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01745 ATGTTTGCCTCAGGATTGGGCCTTTCATTCGAAAGTGAATGGACATATGGGGGATTCCCTTTCTGGTTACATGATGTCCCGGGCATTGTTTACCGGACGGATAATGAGCCATTCAAGTTCTACATGCAAAATTTTACGACAAAAATTGTGAACATGATGAAAGCAGAGAGCTTGTATGCTTCGCAAGGAGGCCCAATTATATTGTCACAGATTGAAAATGAATACCAAAACATCCAAAAGGCATTTGGCCCAGATGGATCGCGGTATGTTGAATGGGCTGCAAAAATGGTGGTGGGCCTTAACACTGGCGTTCCTTGGGTTATGTGCAAGCAAACTGACGCTCCTGATCCTGTGATCAACACATGCAACGGCATGAGATGCGGAGAAACTTTTACCGGACCAAATTCCCCCAAGTAA 417 0.4484 MFASGLGLSFESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMMKAESLYASQGGPIILSQIENEYQNIQKAFGPDGSRYVEWAAKMVVGLNTGVPWVMCKQTDAPDPVINTCNGMRCGETFTGPNSPK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01745 138 Gene3D Glycosidases 6 137 - -
Pumo10g01745 138 Pfam Glycosyl hydrolases family 35 11 131 IPR031330 -
Pumo10g01745 138 PANTHER BETA-GALACTOSIDASE RELATED 11 137 IPR001944 GO:0004553|GO:0005975
Pumo10g01745 138 SUPERFAMILY (Trans)glycosidases 12 132 IPR017853 -
Pumo10g01745 138 PRINTS Glycosyl hydrolase family 35 signature 4 23 IPR001944 GO:0004553|GO:0005975
Pumo10g01745 138 PRINTS Glycosyl hydrolase family 35 signature 61 76 IPR001944 GO:0004553|GO:0005975
Pumo10g01745 138 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 63 75 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01745 Pumo-Chr10 22886283 22887626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01745 6 137 Glycoside Hydrolase AT5G63800 72.727 8.45e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01745 - - gmx:100818637 261.922