Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01712 ATGTCTCCTCCCCTAATGGAATTAAGTGCTTCCACTCTAGTACTTTACCCTGCACAAGAGGCCAAAAATGAGAATGGGGGGATAGTTTTTGACGCAAATTTGCAGCAAATGCAAGGGGAAATGCCCAAAGAGTTCCTTTGGCCATCTGGGGACTTGGTTGACACCACCCAAGAGGAGCTGAAGGAACCCCTTGTGGACTTAGCAATCTTTAAGAATGGTGATGAGAAAGCTATTGCTAATGCTGCAGAGCTTGTGAGGAATGCCTGCTTGAAGCATGGCTTCTTCCAAGTGATTAACCATGGTGTGGACCCAGATCTCATAGATGCTGCCTATCATGAAATTGACTCCATTTTCAAGCTCCCAATGAGCAAAAAGATGAGTGCTAAGAGGAAACCTGGTGGTGTCTCAGGGTACTCTGGTGCTCATGCAGATCGTTATTCGTCCAAGTTGCCATGGAAAGAGACATTTTCTTTCCTCTATGATCACCAAAGCTTCTCCAACACCCAGATTGTTGACTACTTCAAGTCTGTATTAGGCGAGGACCTCCAACACACAGGGAGGGTGTATCAAAAGTACTGTGAAGCAATGAAGGAATTATCTTTAGTAATAATGGAGCTCTTGGCCATTAGTTTGGGAGTGGGTCGTTTGCATTATCGAAATTTTTTTCAAGATGGTGACTCAATAATGAGGTGCAACTATTATCCAACTTGCAACAGTGCCAGCCTCACCTTAGGCACTGGACCTCACACTGATCCAACCTCACTAACCATTCTTCATCAAGACCAAGTTGGAGGTTTAGAAGTTTTTGTAGATAACAAATGGTTGGCTATTCGCCCTCGATCTGAAGCCTTAGTCATAAACATAGGTGACACTTTCATGGCATTGTCAAATGGGAGATACAAGAGTTGTCTACACAGGGCATTGGTGAACACATACAGGGAGAGAAGGTCCCTGGTTTACTTTGTGTGTCCAAGAGAAGACAAAATAGTGAGGCCCCCAGACAATCTGTTATGCAGAAATGAGGAAAGGAAGTACCCTGATTTCACATGGTCCAATTTGTTTGAATTCACACAGAAGCACTATAGGGCTGATGTTGCTACCCTCCAAAGCTTCATTGAGTGGCAATGCTCTTCCAACCCAATGCCATCATCCAACTTCTAG 1161 0.4427 MSPPLMELSASTLVLYPAQEAKNENGGIVFDANLQQMQGEMPKEFLWPSGDLVDTTQEELKEPLVDLAIFKNGDEKAIANAAELVRNACLKHGFFQVINHGVDPDLIDAAYHEIDSIFKLPMSKKMSAKRKPGGVSGYSGAHADRYSSKLPWKETFSFLYDHQSFSNTQIVDYFKSVLGEDLQHTGRVYQKYCEAMKELSLVIMELLAISLGVGRLHYRNFFQDGDSIMRCNYYPTCNSASLTLGTGPHTDPTSLTILHQDQVGGLEVFVDNKWLAIRPRSEALVINIGDTFMALSNGRYKSCLHRALVNTYRERRSLVYFVCPREDKIVRPPDNLLCRNEERKYPDFTWSNLFEFTQKHYRADVATLQSFIEWQCSSNPMPSSNF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01712 386 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 63 353 - -
Pumo10g01712 386 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 224 324 IPR005123 -
Pumo10g01712 386 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 163 IPR026992 -
Pumo10g01712 386 PRINTS Isopenicillin N synthase signature 249 270 - -
Pumo10g01712 386 PRINTS Isopenicillin N synthase signature 284 310 - -
Pumo10g01712 386 PRINTS Isopenicillin N synthase signature 85 102 - -
Pumo10g01712 386 Pfam 2OG-Fe(II) oxygenase superfamily 226 324 IPR044861 -
Pumo10g01712 386 FunFam Gibberellin 20 oxidase 2 32 362 - -
Pumo10g01712 386 Gene3D - 32 362 IPR027443 -
Pumo10g01712 386 SUPERFAMILY Clavaminate synthase-like 38 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01712 Pumo-Chr10 22548292 22553226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01712 40 362 Glycosyltransferase AT5G59530 28.152 2.48e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01712 K05282 - gmx:100816834 730.709