LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo10g01710	ATGGCTTTGGGGAAATATGCTAGAGTAGATGGTAGAAGATCATCGAGTTGGTGTTCGACGGTGACTGTTGTCGTGTTTGTGGCTCTATGCTTGGTTGGGGTTTGGATGATGACATCATCTTCAGTTGTCCCTGTGCATAATGGAGACGAGGCTAAGGAGACAAAGAATGAAGTAAAAGAACAAACCGAGGTGAAAGAATCGGTGAGTGAGGTCAGCAATAGCAATACCCAGCAGTTTGAAGATAATCCAGGTGATTTGCCTGAGGATGCAACCAAGGGGGACAGCAATGTGACCTCTGAAGACAACTCAAACTTGTCAGATAAGCAAGAAGAGAAGTTGGAGGAAAATCCTGTAGAGAGGTCTTCTGACGATACAAAGACGGAAGATGTGGATGCTAAGAAAACTGAGGAGGAAGGTTCTAATACAGAAAATGAATCAAACTCAGACTCTGTGGAAAATAACAAAGACAGTGATGAGACTTCCACTAAGGAATCTGATTCTGACGAGAGTGAGAAGAAATTTGAATCAGATGATAACAAAAAGTCTGATTCAGACGAAAGTGAAAAGCAATCTGATAACTCTGATGAAACAACAGATAGTAGGATAGAGGAGAAGGTCGAAGAAAGTGGTAACAAGGAATCTGATGAAAACTCTAGTGAGAAGGATACAAATGATAATACCAAACAGCAGAGTTCAAATGAGGTATTCCCTTCTGGGGCTCAGTCAGAGCTTCAAGAAGAAAGTACAACTGAAACTGGGTCTTGGTCAACTCAGGCAGCAGAGTCTAAGAATGAAAAGGAGTCTCAAGAATCCTCCAAGCAGCCAACTGAATACAAGTGGAAGCTTTGCAATGTCACTGCTGGTCCTGATTTTATCCCATGCCTTGACAACTGGAAAGCTATTAGGAGTCTCCGGAGTACTAAACACTATGAACATCGAGAAAGGCACTGTCCTGAAGAACCTCCTACCTGCCTTGTTCCTGCTCCTAAAGGATATAAAAACCCAATTGAGTGGCCTAAAAGCAGAGAGAAGATATGGTATCACAATGTTCCACACACCAAGCTTGCTGAAGTTAAGGGCCACCAGAATTGGGTGAAAGTTACGGGCGAGTACCTTACTTTCCCTGGTGGTGGAACCCAATTCAAACATGGGGCGCTTCATTACATTGACTTTATACAAGAGACTGTACCTGACATTGCTTGGGGCAAACGCACACGTGTTATACTAGATGTTGGATGTGGTGTTGCCAGCTTTGGAGGTTTTCTCTTCGATAGAGATGTACTTGCAATGTCATTAGCACCAAAGGATGAACATGAAGCCCAGACTCAATTTGCACTTGAAAGGGGGATTCCTGCTATATCTGCTGTGATGGGCACAAAGAGGCTTCCCTTCCCTGGGAAAGTATTTGATGTAGTCCATTGTGCACGATGTAGAGTTCCGTGGCATATAGAAGGTGGTAAACTTCTTTTGGAGCTGAATAGAGTATTGCGACCTGGTGGATTTTTTGTATGGTCTGCTACTCCTATTTATCAAAAGCTTCCGGAAGATGTTGAAATATGGAATGCCATGAAGGCACTAACAAAAGCAATGTGCTGGGAAGTTGTGTCAATCAGCAAGGATCAAGTAAATGGAGTAGGTGTAGCTGTATACAAGAAGCCAACTTCTAATGAGTGTTATGAGGAACGTTCAAAGAATGAGCCTCCGATGTGTCTAGATTCTGATGATCCTAATGCAGCATGGAACATTAAATTGAAAGCTTGCATGCACAAAGCGCCAGTTAGTTCAAAGGAACGAGGCTCACAATTGCCAGAGCTGTGGCCAGCCAGACTGACCAAAGTGCCTTATTGGTTGTCGAGTTCCCAAGTTGGAGTTTATGGAAAACCAGCCCCTGAAGATTTCACTGCTGATTATAAACACTGGAAACGCGTAGTGTCCAAGTCTTATCTAGATGGGATGGGAATTAAATGGTCAAATGTACGCAATGTCATGGATATGAGATCTATCTACGGAGGGTGA	2016	0.4325	MALGKYARVDGRRSSSWCSTVTVVVFVALCLVGVWMMTSSSVVPVHNGDEAKETKNEVKEQTEVKESVSEVSNSNTQQFEDNPGDLPEDATKGDSNVTSEDNSNLSDKQEEKLEENPVERSSDDTKTEDVDAKKTEEEGSNTENESNSDSVENNKDSDETSTKESDSDESEKKFESDDNKKSDSDESEKQSDNSDETTDSRIEEKVEESGNKESDENSSEKDTNDNTKQQSSNEVFPSGAQSELQEESTTETGSWSTQAAESKNEKESQESSKQPTEYKWKLCNVTAGPDFIPCLDNWKAIRSLRSTKHYEHRERHCPEEPPTCLVPAPKGYKNPIEWPKSREKIWYHNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQETVPDIAWGKRTRVILDVGCGVASFGGFLFDRDVLAMSLAPKDEHEAQTQFALERGIPAISAVMGTKRLPFPGKVFDVVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNAMKALTKAMCWEVVSISKDQVNGVGVAVYKKPTSNECYEERSKNEPPMCLDSDDPNAAWNIKLKACMHKAPVSSKERGSQLPELWPARLTKVPYWLSSSQVGVYGKPAPEDFTADYKHWKRVVSKSYLDGMGIKWSNVRNVMDMRSIYGG	671

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo10g01710	671	MobiDBLite	consensus disorder prediction	48	66	-	-
	Pumo10g01710	671	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	290	671	IPR004159	GO:0008168
	Pumo10g01710	671	CDD	AdoMet_MTases	408	503	-	-
	Pumo10g01710	671	MobiDBLite	consensus disorder prediction	67	82	-	-
	Pumo10g01710	671	FunFam	probable methyltransferase PMT23	380	564	-	-
	Pumo10g01710	671	Gene3D	Vaccinia Virus protein VP39	380	583	IPR029063	-
	Pumo10g01710	671	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	21	671	IPR004159	GO:0008168
	Pumo10g01710	671	MobiDBLite	consensus disorder prediction	104	141	-	-
	Pumo10g01710	671	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	313	558	IPR029063	-
	Pumo10g01710	671	MobiDBLite	consensus disorder prediction	149	223	-	-
	Pumo10g01710	671	MobiDBLite	consensus disorder prediction	224	262	-	-
	Pumo10g01710	671	MobiDBLite	consensus disorder prediction	48	276	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo10g01710	Pumo-Chr10	22513629	22518375	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo10g01710	-		-	gmx:100777586	1109.75