Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01705 ATGAGGAAATTCGCCACCATCTTCTCCCGTTTCAAATCAAAGACGAACATCTCGATTTCGCTTCATCGAAGCTCTCCTCTTCGCCCCAATCAACACCACCCTAATTTCAGGAACCTCACATGGCAGAATCGTAATTCACTATTGTTTTCCCTTCTCTGTTCGCGCCGCTTTGCCTCCACTACAGCACAGAATCCTGCTTCCACATTGAATCCTCTTCAGGATCAGGCCATTGATTTTCCTGGAGGAGCAGTAGAATTCATCCCTGAAATGAGGTTTATATCTGAATCATCTAAAGAGAGAATACCCTGCTACCGTGTCCTTCATGATAATGGGCAACCAATTTTGGGCCATAATTTTGTGCAGGTCAGCAAGGAAGTTGCTGTTAAGATGTATTCTGACATGGTCACTCTCCGATCTATGGACACTATCTTCTATGAAGCACAAAGGCAAGGTAGAATATCGTTTTATGTGACAGCAATTGGAGAGGAGGCTATCAATGTTGCTTCAGCTGCAGCTCTTGCCATGGACGATGTTATTTTCCCTCAGTATAGGGAAGCGGGAGTCTTGTTATGGCGTGGTTTCACTCTGCAAGAATTTGCAAACCAGTTATTTTCCAATAAATATGATAATGGGAAAGGAAGGCAGATGCCAGCTCATTATGGATCCAACAAGCACAATTACTTTACAGTAGCATCAACTATTGCTACACAAATTCCCCATGCTGTTGGAGCCGCTTATTCCTTAAAGATGGATAAAAAGGATGCATGTGCTGTCACTTACTTCGGTGATGGTGGCTCAAGTGAGGGAGATTTCCACGCTGCTTTAAATTTTGCAGCAGTTTTGGAGGCCCCAGTTATTTTTATATGCCGGAACAATGGATGGGCTATTAGCACACCCATTTCAGATCAGTTTCGAAGTGATGGTGTTGTCGTGAAAGGGCAAGCATATGGAGTCCGTAGCATTCGTGTAGATGGCAATGATGCCCTGGCCATCTATAGTGCTATTCAAGCTGCTCGTCAAATGGCAATTACTGAAGAGAGACCAATTCTAATAGAAGCTCTTACATATAGAGTGGGACACCACACCACATCAGATGACTCTACCAAGTATCGTCCAGCGAATGAGATTGAATGGTGGAGAGTGGCACGTGATCCTGTGGCTAGATTTAGAAAGTGGATAGAAAGGAATGGCTGGTGGAATGATGTGGCTGAGTCAGAGCTTATAAACAATTTGAGACAACAGCTTCTACATACAATTCAAGTCGCAGAGAGTGTAGAAAAACCTCCGCTTGCAGATACTTTTGGTGATGTTTATGATGTCCCTCCATCCAATCTCCGTGAACAGGAGCAATGGCTGAAGGAGATTGTAAAAAAACAACCCCAAGAGTACCCAGCAAATATTCCTGTGTAG 1410 0.4383 MRKFATIFSRFKSKTNISISLHRSSPLRPNQHHPNFRNLTWQNRNSLLFSLLCSRRFASTTAQNPASTLNPLQDQAIDFPGGAVEFIPEMRFISESSKERIPCYRVLHDNGQPILGHNFVQVSKEVAVKMYSDMVTLRSMDTIFYEAQRQGRISFYVTAIGEEAINVASAAALAMDDVIFPQYREAGVLLWRGFTLQEFANQLFSNKYDNGKGRQMPAHYGSNKHNYFTVASTIATQIPHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVLEAPVIFICRNNGWAISTPISDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYSAIQAARQMAITEERPILIEALTYRVGHHTTSDDSTKYRPANEIEWWRVARDPVARFRKWIERNGWWNDVAESELINNLRQQLLHTIQVAESVEKPPLADTFGDVYDVPPSNLREQEQWLKEIVKKQPQEYPANIPV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01705 469 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 72 468 - -
Pumo10g01705 469 CDD TPP_E1_PDC_ADC_BCADC 130 422 - -
Pumo10g01705 469 Gene3D - 72 467 - -
Pumo10g01705 469 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 103 464 IPR029061 -
Pumo10g01705 469 Pfam Dehydrogenase E1 component 134 428 IPR001017 GO:0016624
Pumo10g01705 469 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 72 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01705 Pumo-Chr10 22428899 22434738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01705 75 307 Acyl Lipid Metabolism Gene Families AT5G09300 81.545 8.39e-141 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01705 K00166 - gmx:100779198 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01705 10 22428899 22434738 Pumo10g01705 10 22428899 22434738 ECH