Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01702 ATGGAATCCGACAAAACAACCTTTGCCGCCGTGGTCCTGGGAACCTGTACCCGACCCTCCTGGGCCCTCATCTTCCTCCTCTTCACCTTCGTCACCTTTATCTCCCTCCACCTTCCATCCAGGCCCGTTTGGTTCCTCTCGGGCCCACACCCCGGGCCCGATCCAACCTGCGCCGGCTTCTTCAGCGATGTTCCGCCGAGGAAGGTCGTCATGTCGATCGAGGATTTCGGCGGCGTCGGCGACGGGAAAACATCCAACACTGAATCGTTTCGGAGGGCGATTCGGTACATGCAGCGCTTCCAGAACCGCGGTGGGGCCCAGCTGAATATCCCCACCGGAACTTGGCTCACCGGCAGTTTCAATCTCACAACTGGTGTACGCATAAAATCCGACAAAGGCAGAGGAGGCTATGTAGCCAATGTTAGTATCAGTGATATAAGAATGGAGAGAGTGAAGATACCCATTAGGTTCAGTAGAGGTTCAAATGACCATCCTGATGATGGGTGGGATCCAAAAGCTGTTCCTAGATTCAAAGATATTTTGATCAGTAATGTGGTCAGTGTAAATTCAACAAAAGCCCCAGTTTTGGAAGGTGTAGAGGGTTCAACATTTGAAGGCTTATGCTTCAAAAACATTACCCTGCATGGTGTAGCCTTATCTGCAAGATGGCGTTGTGAATATGTCTCTGGTTTTGCCACCGAGGTTTTCCCTGTTCCTTGTCTTGAGTTGCGGAACAATAGTTATTCATCTTTGTGTTCACCTTCCTGA 768 0.5052 MESDKTTFAAVVLGTCTRPSWALIFLLFTFVTFISLHLPSRPVWFLSGPHPGPDPTCAGFFSDVPPRKVVMSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNLTTGVRIKSDKGRGGYVANVSISDIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSTFEGLCFKNITLHGVALSARWRCEYVSGFATEVFPVPCLELRNNSYSSLCSPS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01702 255 Gene3D - 124 220 IPR012334 -
Pumo10g01702 255 PANTHER PECTIN LYASE-RELATED 40 124 - -
Pumo10g01702 255 Pfam Glycosyl hydrolases family 28 123 229 IPR000743 GO:0004650|GO:0005975
Pumo10g01702 255 Gene3D - 67 123 IPR012334 -
Pumo10g01702 255 SUPERFAMILY Pectin lyase-like 121 244 IPR011050 -
Pumo10g01702 255 SUPERFAMILY Pectin lyase-like 69 132 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01702 Pumo-Chr10 22393065 22396557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01702 118 243 Glycoside Hydrolase AT4G33440 53.676 1.43e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01702 - - vra:106780727 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01702 10 22393065 22396557 Pumo10g01702 10 22393065 22396557 ECH