Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01657 ATGGTAAGCAGAGGCTCGTACAGCTCTAGCAGCCTCTTGTCTGGTAGATTTCATGCTAGGAAGCTATCTCCTAGTGTTATCACTTTCTACACCATGTTCATATTTGCTTTCTCCATCTTCGTGTTCTTGTTCTACGCGAGGAACATCAGTGTTGATGAAGATCCACCACACCCTCTGCTTTCTCAACAATCTAAATCTCACCAGGTGCCAGAGTTACATGTGCACTATAAGCAACTTTGGGACTCTCCGTTCAATCATGGCTTAAACCAATGTGTCAAGCCGACTACTAAATATAAAGCTGCCCAAGGATTTGATCACTATCTAACTGTGAGAAGTAATGGTGGACTAAATCAAATGCGAACTGGTATATCAGACATGGTAGCTGTGGCACATATAATGAATGCAACTTTAGTTATACCTCAATTGGATAAACGTTCATTCTGGAAAGATACAAGTGTATTTTCAGATATATTTGATGAGCTTCATTTCATCGAATCCCTGAAAGGAGATATCAGGATTGTTAGTGAGCTTCCCAAAAACTTGGAAGGTATCCCCCGGGCCAGGAAACACTTCACTTCCTGGTCTGGAGTCGGTTACTATGAAGAGATGACAAGGTTATGGAGTGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTGGACATACAGAGGTTGAGATGCCGTGCGATGTATCATGCACTTCGATTTTCTCCTCCTATAGAGAATTTAGGAAAGAGGTTGGTGGATCGGCTGAGATCACACGGAGGAAGATATATTGCTCTCCATCTGAGATATGAGAAGGATATGCTGTCTTTTACTGGTTGTGCATATGGTCTGACAGATGCAGAATCTGAAGAGCTTACAATTTTGAGGGAGAATACAAATTATTGGAAAGTAAAAAAGATAAATTCAACAGAACAGAGAATTGGAGGATTTTGTCCGCTGACTCCAAAGGAGGTGGGCATTTTTCTTCATGCTCTTGGGTATCCCCCATCTACACCAATATACGTTGCTGCAGGAGAGATCTATGGTGGTAATACTCATCTTTCGGAGCTCTCATCCCGCTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGATTTCGCTAATCATGCTTCCCAAACTGCTGCACTTGATTACATAATCTGCGTTGAGAGTGATGTATTTATTCCGTCATATTCAGGAAATATGGCAAGAGCAGTTGAGGGACACCGCAGATTCTTAGGTCATCGCAAGACAATCAACCCAGACAGGAAAGGACTTGTTGGAATTTTTGATATGCTGGAAACTGGAGAGCTAGAAGAAGGAAGGGAACTGTCAAATATGGTGCAGCGGATGCACAAGAACAGGCGAGGAGCTCCAAGGAAAAGGCACGGTTCCCTACCGGGAGTTAAAGGCCGAGCACGATTTAGGACTGAAGAGTCCTTTTATGAAAATCCATATCCTGAGTGTATATGTGGTTCTAGAAGCAAACTAGAAATAACATGA 1533 0.4234 MVSRGSYSSSSLLSGRFHARKLSPSVITFYTMFIFAFSIFVFLFYARNISVDEDPPHPLLSQQSKSHQVPELHVHYKQLWDSPFNHGLNQCVKPTTKYKAAQGFDHYLTVRSNGGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWKDTSVFSDIFDELHFIESLKGDIRIVSELPKNLEGIPRARKHFTSWSGVGYYEEMTRLWSDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYHALRFSPPIENLGKRLVDRLRSHGGRYIALHLRYEKDMLSFTGCAYGLTDAESEELTILRENTNYWKVKKINSTEQRIGGFCPLTPKEVGIFLHALGYPPSTPIYVAAGEIYGGNTHLSELSSRFPNLIFKESLATPEELKDFANHASQTAALDYIICVESDVFIPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVGIFDMLETGELEEGRELSNMVQRMHKNRRGAPRKRHGSLPGVKGRARFRTEESFYENPYPECICGSRSKLEIT 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01657 510 Pfam GDP-fucose protein O-fucosyltransferase 107 422 IPR019378 -
Pumo10g01657 510 CDD O-FucT_plant 107 428 IPR024709 -
Pumo10g01657 510 PIRSF UCP009360 3 505 IPR024709 -
Pumo10g01657 510 PANTHER OS02G0726500 PROTEIN-RELATED 30 502 - -
Pumo10g01657 510 Gene3D - 242 431 - -
Pumo10g01657 510 FunFam O-fucosyltransferase 28 237 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01657 Pumo-Chr10 21766758 21774320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01657 76 501 Miscellaneous Gene Families AT1G22460 59.016 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01657 - - gmx:100810961 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01657 10 21766758 21774320 Pumo10g01657 10 21766758 21774320 ECH