Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01654 ATGGCTTCTAAGATCTTCTTCCTATTTCTCCTCTTTCTAGCACACCCTCATCCACATGCATTTGTGAAGGGAGATGCCAGTTTGATCAAGAGAACTTGCAAGAACACCAAGTACTACAATCTATGCTTCTCTTCCCTCAAATCTGATCCTAGCAGCCCAAACGCAGATCCAAAGGGCCTAGCTGTGATCATGATTGGGATTGGAATGACCAATGCCACTTCCACTTCTTCCTACTTGTCTTCCAAGTTGCTTAGCCCCACCAACAACACAACCTTGAAAAGGGTCCTCAAGGAGTGTGCAGATAAGTACACCTATGCTGGTGATGCCCTCCAAGCTTCGGTGCCGGATTTGGCTAATGAGGCTTATGACTATGCTTACATGCACATCACTGCCGCCAGAGATTACCCAAATGCTTGCCACAACGCTTTCAAACGGTACCCCGGTTTGGTTTATCCCCCTGATCTTGCTCGTAGAGAAAATGGTTTGAAGCATATCTGTGATGTGGCAATGGGGATTATAGATAATCTCGATTGGTAG 537 0.4618 MASKIFFLFLLFLAHPHPHAFVKGDASLIKRTCKNTKYYNLCFSSLKSDPSSPNADPKGLAVIMIGIGMTNATSTSSYLSSKLLSPTNNTTLKRVLKECADKYTYAGDALQASVPDLANEAYDYAYMHITAARDYPNACHNAFKRYPGLVYPPDLARRENGLKHICDVAMGIIDNLDW 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01654 178 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 176 IPR035513 -
Pumo10g01654 178 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 176 - -
Pumo10g01654 178 CDD PMEI_like 33 175 - -
Pumo10g01654 178 FunFam Cell wall / vacuolar inhibitor of fructosidase 2 24 176 - -
Pumo10g01654 178 NCBIfam pectinesterase inhibitor domain 4 176 IPR006501 GO:0004857
Pumo10g01654 178 SMART PMEI_2 24 172 IPR006501 GO:0004857
Pumo10g01654 178 Pfam Plant invertase/pectin methylesterase inhibitor 27 171 IPR006501 GO:0004857
Pumo10g01654 178 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01654 Pumo-Chr10 21745448 21746332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01654 - - gmx:100306461 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01654 10 21745448 21746332 Pumo10g01654 10 21745448 21746332 ECH