Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01640 ATGGGAGCGTCCACTTCGGCGGAGCCGAGAGTCTCGGCGGAACAGAAAGAGGCGGAGGCCGTCGCAGCCTCCACCGGAGCTCTTCCGATGCTTCAGAAAGCTTTCTCCAAGCTCGCCAATCCCGAGACCAACGCCGTCCCCTTAGAAAATCTCCAGCAATGCTTCAGTTTCGGTCGAAGTTATTCCGGAAGCAACGTGCCAGATTCGTTTCCGGTGTTATTAGATCACTTAGCCTCATCCCTAGTGGGTCTATTTTTCGTGCCTAATAAAGAGGGAATAAATTGGATTGAATTCGTGAGTGGCTATAACAAGTGCTGTGCTAGGGTGGCCGCGTCGGTTTCGCTGAACACGCTCATGAGAGTGTTCGTTGCTACCTCGGGGAGCGCGAACGTGCAGTTGAATTTGGAGTTTGAATCAGGGGATGATGATTGTAAGATTAACGGGCACCTTCTTCCTAGCCACGTGTTTCTGCTTCTCGCCCTGTGTTGGGTTATGTCGTGGGGTGGTTCTAGAAACTTGAAGGGGGAAGGGAATCTAAGCCTACCGGATCTGAATCATTTGGTGTTGTCGGTGATCACATCGTGTGGTCAAGTTGAGGGTGGTTTGAATGTGTGGGACTGTGATATCTCGAGCTTGGAGGTTCAGCTTCCTGCAGGGAAGTTTGTAACGTGGGTTATGAGTACCGTGCCGTGCCTCCCGGATTGTTTAAGGCAGTATTTTCATGCTAGACTGCAAATGGCAGCATCTGATGGGGTTGAATTGGCATCCTCTAATTCCTCCTCTGTTGGAGATATTTCATCAATAGCTGCAAATGATTATATTTTGACCCTAGGAAGGGCATGGGCAATCTCTATCACACAGAAAAGTACAGTAAATGAAGAGATTTCTAGAGCATTTATAAGCAATGGAGGTGGAATGGAAGATAACCTTGTTTATCGGTCATCCACTCATGGAAGAGGCCTTGGCAGATTTTGGTCTCATGTTGAAGGTTACAAAGGTCCTTTGTTAATTTTGATAGCTGCAAGTTCAGGAGATGCTCATGAGGGAAATTCCATCGATAGGAAATGGTTTATAGGTGCCCTAACAGATCAAGGTCTTGTAAGTAAAGATATCTTCTATGGAAACTCTGGATGTCTATATTCTATTGGCCCAGTGTTTCATGTGTTTCCACCTACTGGTAAGGAAAAGAATTTTGTTTATAGCCACTTGCATCCTACTGGTAAAGTATACCAACCACATCCAAAGCCAGTTGGAGTTGCATTTGGAGGAACTCCGGGAAATGAGAGAATATTTATAGACGAAGATTTTGCAAAAGTGACTGTTCGCCATCATGCTATTGACAAAACATACCGGAGTGGATCCCTCCTTCCAGATCAGGGTTTCCTACCTGTCGAGGGTCTGATTTCTGAAGTTGAAGTTTGGGGACTTGGTGGGAAAGTAGCAAAGGAAGTGCAGAACTCTTACAAGAAGAGAGAAGAACTTTTCACTGAGCAAAGAAGAAAAGTTGACTTGAAGACATTCGCAAGTTGGGAGGATTCATCTGAGAAAATGATGATGGACATGATGTCTGATCCAAATGCTGTTCGAAGGGAAGAGCGCTGA 1602 0.4588 MGASTSAEPRVSAEQKEAEAVAASTGALPMLQKAFSKLANPETNAVPLENLQQCFSFGRSYSGSNVPDSFPVLLDHLASSLVGLFFVPNKEGINWIEFVSGYNKCCARVAASVSLNTLMRVFVATSGSANVQLNLEFESGDDDCKINGHLLPSHVFLLLALCWVMSWGGSRNLKGEGNLSLPDLNHLVLSVITSCGQVEGGLNVWDCDISSLEVQLPAGKFVTWVMSTVPCLPDCLRQYFHARLQMAASDGVELASSNSSSVGDISSIAANDYILTLGRAWAISITQKSTVNEEISRAFISNGGGMEDNLVYRSSTHGRGLGRFWSHVEGYKGPLLILIAASSGDAHEGNSIDRKWFIGALTDQGLVSKDIFYGNSGCLYSIGPVFHVFPPTGKEKNFVYSHLHPTGKVYQPHPKPVGVAFGGTPGNERIFIDEDFAKVTVRHHAIDKTYRSGSLLPDQGFLPVEGLISEVEVWGLGGKVAKEVQNSYKKREELFTEQRRKVDLKTFASWEDSSEKMMMDMMSDPNAVRREER 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01640 533 ProSiteProfiles TLDc domain profile. 281 477 IPR006571 -
Pumo10g01640 533 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 195 476 - -
Pumo10g01640 533 Pfam TLD 310 477 IPR006571 -
Pumo10g01640 533 SMART 109ultra 288 477 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01640 Pumo-Chr10 21581194 21586035 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01640 - - gmx:100786867 977.622