Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01608 ATGTATCTCAAGAACCTCGAGAACCTGATCCTGGATTTCAACGACTTGACTGGGAACATTCCCTCCGGGCTCGTTAACTGCACCAAGCTGAATTGGATCTCCCTCTCCAACAACAGGCTCAGCGGCGAGATTCCGGCGTGGATTGGGAAGCTTTCTAATCTCGCAATACTCAAGCTCAGTAACAACTCCTTCACCGGAAGGATTCCGCCGGAGCTTGGCGATTGTACTAGCTTGATATGGTTGGATCTGAATACTAATTCGCTCACCGGGCCCATTCCGCCCGAGCTGTTCAAGCAGTCGGGGAAGATCGCTGTGAATTTCATTAGTGGGAAGACGTATGTGTATATCAAGAATGATGGGAGCAAGGAGTGCCATGGTGCGGGGAACTTGCTGGAGTTTGCGGGAATCAGTCAGCAGCAGCTGAACAGGATTTCGACGAGGAACCCCTGCAATTTCACTAGGGTTTATGGAGGTAAGTTGCAGCCAACGTTTAACCATAATGGTTCTATGATATTTTTGGATATCTCGCACAACATGTTGTCAGGGAGTATTCCGAAGGAAATTGGGGCCATGTACTATTTGTACATTCTCAATTTGGGCCATAATAATGTGTCTGGGAGCATTCCTCAAGAGCTTGGGAAGATGAAGAATCTCAACATTCTTGATCTCTCGAATAATAGATTGGAGGGGCAAATTCCGCAGAGTCTCACGGGGCTTTCCTTGCTCACTGAGATTGACTTGTCCAACAACTTGCTTTCGGGGACTATTCCTGAGTCGGGTCAATTTGATACTTTCCCTGCGGCCAGGTTTCAGAACAACTCTGGTCTCTGTGGAGTTCCTCTGTCCCCGTGTGGTTCAGACCCGGCAACCAATGGGAATTCGCAACGTATGAAGTCTCACAGGAGGCAGGCTTCTCTGGCGGGGAGTGTGGCCATGGGGTTGTTGTTTTCCCTCTTCTGCGTCTTTGGTTTGATCATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAGGAGGCTGCTCTTGAAGCCTATGGTGATGGTAATTCGCATTCGGGTCCGGCCCATGTGAGCTGGAAGCACACCAGTACCCGTGAAGCTCTTAGCATAAACCTTGCAACGTTTGAGAAGCCACTGCGGAAGCTTACTTTTGCGGACCTACTGGATGCTACCAATGGCTTTCACAATGACAGTCTCATTGGGTCTGGCGGGTTTGGGGACGTGTACAAGGCTCAGTTGAAGGATGGAAGTGTGGTGGCTATCAAGAAGCTGATACATGTTAGCGGACAAGGGGACAGGGAGTTCACTGCTGAAATGGAGACTATTGGGAAAATCAAGCACAGGAACCTTGTTCCCCTGTTGGGATACTGCAAGGTTGGGGAAGAGAGACTCTTGGTTTATGAGTACATGAAATATGGAAGCTTAGAAGATGTTCTGCATGATCGGAAGAAAGCTGGGATCAAGCTGAACTGGGCGATTAGGAGGAAAATTGCCATTGGAGCTGCTAGGGGATTGGCTTTTCTTCACCACAGTTGTATCCCCCACATCATCCATAGAGACATGAAGTCGAGCAATGTGTTACTTGATGAAAACCTGGAAGCTAGGGTCTCTGATTTTGGAATGGCCAGGCTTATGAGTGCTATGGATACACATTTGAGTGTGAGCACACTGGCAGGCACCCCGGGGTACGTTCCTCCTGAGTACTATCAGAGCTTCAGATGCTCCACCAAAGGTGATGTCTACAGTTACGGTGTGGTTTTGCTGGAGCTGCTAACTGGGAAAAGGCCAACGGACTCGGCTGATTTTGGTGATAATAATCTTGTTGGATGGGTTAAACAACATGCCAAGCTGAAAATAAGTGATATTTTTGACCCGGAGCTCATGAAGGAAGACCCCAATCTGGAGATGGAGCTTTTGCAGCACCTGAAGATTGCGGTTAACTGTTTGGATGATCGGCCGTGGAGGCGTCCGACGATGATCCAAGTGTTGACAATGTTCAAGGAGATTCAGGCGGGATCCGGGATTGATTCTCAGTCAACCTTAGCCAACGAAGAGGAAGGTTTCAATGCAGTTGAAATGGTGGAGATGAGCATTAAAGAAGCCCCTGAATTGAGCAAGCATTAG 2124 0.4845 MYLKNLENLILDFNDLTGNIPSGLVNCTKLNWISLSNNRLSGEIPAWIGKLSNLAILKLSNNSFTGRIPPELGDCTSLIWLDLNTNSLTGPIPPELFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQQQLNRISTRNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKEIGAMYYLYILNLGHNNVSGSIPQELGKMKNLNILDLSNNRLEGQIPQSLTGLSLLTEIDLSNNLLSGTIPESGQFDTFPAARFQNNSGLCGVPLSPCGSDPATNGNSQRMKSHRRQASLAGSVAMGLLFSLFCVFGLIIIAIETRKRRKKKEAALEAYGDGNSHSGPAHVSWKHTSTREALSINLATFEKPLRKLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKAGIKLNWAIRRKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDIFDPELMKEDPNLEMELLQHLKIAVNCLDDRPWRRPTMIQVLTMFKEIQAGSGIDSQSTLANEEEGFNAVEMVEMSIKEAPELSKH 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01608 707 PRINTS Leucine-rich repeat signature 215 228 - -
Pumo10g01608 707 PRINTS Leucine-rich repeat signature 170 183 - -
Pumo10g01608 707 ProSiteProfiles Protein kinase domain profile. 394 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01608 707 SMART LRR_typ_2 76 99 IPR003591 -
Pumo10g01608 707 SMART LRR_typ_2 215 238 IPR003591 -
Pumo10g01608 707 SMART LRR_typ_2 3 27 IPR003591 -
Pumo10g01608 707 SMART LRR_typ_2 51 75 IPR003591 -
Pumo10g01608 707 SMART LRR_typ_2 239 264 IPR003591 -
Pumo10g01608 707 Gene3D - 106 166 - -
Pumo10g01608 707 SUPERFAMILY L domain-like 3 284 - -
Pumo10g01608 707 FunFam Brassinosteroid LRR receptor kinase 470 671 - -
Pumo10g01608 707 Gene3D Phosphorylase Kinase; domain 1 355 469 - -
Pumo10g01608 707 Pfam Leucine rich repeat 194 252 IPR001611 GO:0005515
Pumo10g01608 707 Pfam Leucine rich repeat 5 63 IPR001611 GO:0005515
Pumo10g01608 707 Gene3D Transferase(Phosphotransferase) domain 1 470 671 - -
Pumo10g01608 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Pumo10g01608 707 Gene3D Ribonuclease Inhibitor 1 284 IPR032675 -
Pumo10g01608 707 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 671 - -
Pumo10g01608 707 SUPERFAMILY Protein kinase-like (PK-like) 380 671 IPR011009 -
Pumo10g01608 707 Pfam Protein kinase domain 394 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01608 707 SMART serkin_6 394 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g01608 707 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 92 - -
Pumo10g01608 707 FunFam Serine/threonine-protein kinase BRI1-like 1 108 165 - -
Pumo10g01608 707 ProSitePatterns Protein kinases ATP-binding region signature. 400 423 IPR017441 GO:0005524
Pumo10g01608 707 CDD STKc_IRAK 400 669 - -
Pumo10g01608 707 FunFam serine/threonine-protein kinase BRI1-like 2 355 469 - -
Pumo10g01608 707 Pfam Brassinosteroid receptor island domain 101 165 IPR045381 -
Pumo10g01608 707 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 162 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01608 Pumo-Chr10 21137998 21142137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01608 1 703 Receptor kinase-like Gene Family AT4G39400 78.622 0.0 1128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pumo10g01608 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01608 K13415 - gmx:100499629 1370.91