Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01594 ATGAGTGGGTTGGGATACGAAGCCATGTCGTGCCCCTCTCCTTCAGAAGAGTCACCGAGCCCCAACAACCTAATCCCATCCCTCCCAGACGACGTCGCTTTGAACTGCATAGCACGCATCCCTCGCTCCCACTACCCAACCCTCTGGCTTGTGTCCAAACCAATCCGATCCCTACTCTCTTCCCCGCTCTTGTTCACCACGCGCTCCCTCCTCCAATGCACCCAGCCCCTCCTCTACCTCACTCTCCGCTCACGCGACTCTTCTCTCCAATGGTTCACGCTCCACCGCACAAACCCTAACCCTGTTCTTGCTCCGCTTCCCCCGATCCCCTCCCCCGCCGTGGGCTCCGCCTACGCCGTCCTGGGCCCCACCATCTACGTCCTCGGCGGCTCCATCAACGACGTCCCCTCCCCCCACGTCTGGCTCCTCGACTGCCGCTTCCACCGCTGGCTCCCCGGGCCCCCCATGCGCGTCGCCCGCGAGTTCGCCGCCGCCGGCGTCCTCGGCGGCAAGATCTACGTCCTCGGCGGCTGCGTCGCCGACACCTGGTCCCGCTCCGCCAACTGGGCCGAGGTCCTCGACCCCGCCACAGGCCGCTGGGAGAGGGTGGCGAGTCCGACGGAAGTCCGGGAGAAGTGGATGCACGCCAGCGCCGTCGTCGGCGACCGGGTCTACGCGATGGCGGACCGCGGCGGCATCGCGTTCGAGCCGGGCAGCGGCGCGTGGGAGAGCGTGGGGGGAGAATTGGACCACGGGTGGAGGGGGAGGGCGTGCGTGGTGGAGGGGATTTTGTACTGCTACGACTATTTGGGGAAGATCAAAGGGTTCGATGTGGGGCGCGGGGTGTGGGAGGAGTTGAAGGGGTTGGAGAAGGGGTTGCCGAGGTTTCTGTGTGGGGCCACCATGGCTGATTTGGGTGGGAAATTGTGCGTGGTTTGGGAGTGCCAAGGGAATGGGAAGGAAATGGAGATTTGGTGCGCTGAGATTGGGGTGAAGAAGAATCCTGATGGGGAATTGTGGGGTCAACTTGGTTGGTTCGGGAAGGTTCTCTCTGTTCCCAAAGGCTCTTCCATTGTCAACTGTTCTGCTGTTGCCTTGTGA 1101 0.634 MSGLGYEAMSCPSPSEESPSPNNLIPSLPDDVALNCIARIPRSHYPTLWLVSKPIRSLLSSPLLFTTRSLLQCTQPLLYLTLRSRDSSLQWFTLHRTNPNPVLAPLPPIPSPAVGSAYAVLGPTIYVLGGSINDVPSPHVWLLDCRFHRWLPGPPMRVAREFAAAGVLGGKIYVLGGCVADTWSRSANWAEVLDPATGRWERVASPTEVREKWMHASAVVGDRVYAMADRGGIAFEPGSGAWESVGGELDHGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGNGKEMEIWCAEIGVKKNPDGELWGQLGWFGKVLSVPKGSSIVNCSAVAL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01594 366 SUPERFAMILY Kelch motif 84 346 IPR015915 GO:0005515
Pumo10g01594 366 Gene3D - 69 343 IPR015915 GO:0005515
Pumo10g01594 366 SMART kelc_smart 171 223 IPR006652 GO:0005515
Pumo10g01594 366 SMART kelc_smart 124 170 IPR006652 GO:0005515
Pumo10g01594 366 CDD F-box_AtAFR-like 24 68 - -
Pumo10g01594 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 350 - -
Pumo10g01594 366 MobiDBLite consensus disorder prediction 1 24 - -
Pumo10g01594 366 Pfam Kelch motif 160 206 IPR006652 GO:0005515
Pumo10g01594 366 Pfam Kelch motif 113 157 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01594 Pumo-Chr10 21003184 21004284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01594 17 350 Miscellaneous Gene Families AT4G33900 38.398 3.75e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01594 - - gmx:100798508 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01594 10 21003184 21004284 Pumo10g01594 10 21003184 21004284 ECH