Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01485 ATGTCTAAAATCACAATAACCTCTCCAAAACACTGTGCTGACAAAGAAGGACTGAAATTTAAGAAGAACTACAAGAAGCTCTGCTATACTTTGTCAGCATTTTTCACCACAATCCTACTACTAATACTTCTTATATGGCTGATCCTCCACCCTGCCAAGCCTCAATTCTCCCTCAAAGAAGTTGACATCTACCAACTAAACCTCTTAGGCCCCAACCTCAACTCCTCCATCCAACTCACCCTCCTCTCAAAGAACCCAAACCAGAAAGTTGGCATTTACTACGACGAGATTCAACTCTATGCAACCTACAAGGGGCAACAAATTACCGGTGATACCCCTGTGCCACCCTTCTACCAAGGCCAAGAGGAGAGTAATCTCATAACAGCCTCTTTGGTTGGAAATGGTTTACCCGTGGCTCCCTCTCTTGGCTATGAACTGGGTCGTGATCAAACTGTTGGAAGACTAATTTTGAATCTCAAAGCCAATGGAAAGCTTCGTTGGAAGGTGGGAACGTGGGTCTCTGGACGTTACAGGTTCAATGTTAATTGTGTTGCTATCAATGCCTTTGGACCCTCTATTCCTGCAGGTCCTCTCACTTCAAAGCAAGGGGCTCAGTGTTCCACCACACTTTAA 633 0.4487 MSKITITSPKHCADKEGLKFKKNYKKLCYTLSAFFTTILLLILLIWLILHPAKPQFSLKEVDIYQLNLLGPNLNSSIQLTLLSKNPNQKVGIYYDEIQLYATYKGQQITGDTPVPPFYQGQEESNLITASLVGNGLPVAPSLGYELGRDQTVGRLILNLKANGKLRWKVGTWVSGRYRFNVNCVAINAFGPSIPAGPLTSKQGAQCSTTL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01485 210 PANTHER OS05G0367900 PROTEIN 25 197 IPR044839 GO:0098542
Pumo10g01485 210 Pfam Late embryogenesis abundant protein 80 183 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01485 Pumo-Chr10 19723900 19724869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01485 27 183 EF-hand Containing Proteins AT5G21130 26.087 1.06e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01485 - - gmx:100783857 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01485 10 19723900 19724869 Pumo10g01485 10 19723900 19724869 ECH