Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01483 ATGGCCACACTCTTTAACTTTCACACCACCCTTCGTCCCTCTTGTTATCTTCCCTCATCACCCTCATCTTATATACTAGCTCCGCCCCACTTCTCCAAGACACTCTCCACAACTTTCTTGGGCCACACCGTAACCCTCAAATATGCTGCCACTTCCACAAGCATCCGTGCCCGTTCACTCTCCGCTCGCATGTCATGGGACGGTCCTCTCTCTTCCGTCAAATTGATCATTCAGGGTAAAAATCTCGAGCTCACCGATGCAGTGAAGCAGCACGTGGAAGACAAGGTGGGGAAAGCGGTTCAGAAGCACAGTCATCTAGTGAGAGAGGTTGATGTGAGGCTTTCTATTCGAGGAGGAGGTGAATTTGGGCGAGGACCCAGAACTCGTAAATGTGAGGTGACTTTGTTCACAAAGAGGCACGGAGTGGTGCGGGCTGAGGAGGATGCAGAAAGCACCTATGGAAGCATAGATTTGGTGTCATCAATCATTCAGAGGAAGTTGAGGAAAATAAAGGAAAAGGAGTCAGATCATGGTCGCCACATGAAGGGGTTCAATAGGTTGAAGGTTAGGGAGCCCGTGGAGCAATTACCTGTGGAAGAGGATGAAATATTATCCCCACAGGAGGAGGAAGAATCAATTGACGAGGTTGTTCGCACAAAGTACTTTGACATGCCGCCATTGACTGTGGCTGAAGCAATTGAGCAGCTTGAAAATGTTGATCATGACTTTTATGGTTTTCGAAATGAAGAAACTGGGGAAATTAATATTGTGTACAAACGAAAAGAAGGAGGATATGGACTCATTATACCCAAAGGTGATGGTGAAGCAGAGAAATTGGAGCCTGTAGTGTTTGAACCAGCTATAGAATCCTCCCTGAAAGAATGA 885 0.4678 MATLFNFHTTLRPSCYLPSSPSSYILAPPHFSKTLSTTFLGHTVTLKYAATSTSIRARSLSARMSWDGPLSSVKLIIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRKCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVEQLPVEEDEILSPQEEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGDGEAEKLEPVVFEPAIESSLKE 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01483 294 FunFam ribosome-binding factor PSRP1, chloroplastic 226 277 - -
Pumo10g01483 294 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 74 180 IPR036567 -
Pumo10g01483 294 Gene3D - 74 185 IPR036567 -
Pumo10g01483 294 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 76 173 IPR003489 GO:0044238
Pumo10g01483 294 Gene3D - 226 275 IPR038416 -
Pumo10g01483 294 PANTHER 30S RIBOSOMAL PROTEIN 59 280 - -
Pumo10g01483 294 FunFam Ribosome-binding factor PSRP1, chloroplastic 75 178 - -
Pumo10g01483 294 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 214 267 IPR032528 -
Pumo10g01483 294 NCBIfam ribosome-associated translation inhibitor RaiA 74 178 IPR003489 GO:0044238
Pumo10g01483 294 CDD RaiA 74 173 IPR003489 GO:0044238
Pumo10g01483 294 Hamap Ribosome hibernation promoting factor [hpf]. 73 271 IPR034694 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01483 Pumo-Chr10 19707560 19709943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01483 - - gmx:100784915 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01483 10 19707560 19709943 Pumo10g01483 10 19707560 19709943 ECH