Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01470 ATGGCTCAAGCACTATCAACTTCATCACCACTACTATCACAAAAAACAGGGTACTCTGTCAAACCACAGAACAATGTTATTGCACCTTGCATGGTCTCTTTTCCGTCAAGGAAGGAGTTGCCTAAGCTAGGAAGAGTGAGAGCTCAGGCTTCTGGTGATAACAAAGACAACTCTGTGGAAGTACAACATGTTAGCAAGGGCGACCAAGGGACTGCAGTTGAGAGGAAGCCACGTAGAACTGCCTTGGACATTTCACCATTTGGTCTCTTGGACCCGTGGTCACCCATGAGGAGCATGCGCCAGATTTTGGACACAGTGGACCAAATTTTCGAAGATACAATGACATTCCCTGGAAGAAACGTGGGGGGAGGGGAGATCCGTGCCCCTTGGGACATCAAAGATGAAGAACATGAAATCAAAATGAGGTTTGACATGCCGGGTCTTTCCAAGGAACATGTTAAGGTATCAGTGGAGGATGATGTGCTTGTTATAAAAGGTGGCCACAAGAGTGAACAAGAACAAGGTGGAGATGATTCTTGGTCAAGCAGAAGCTATAGTTCCTATGATACCCGCTTGAAGCTTCCGGATAACTGCGAGAAGGACAAGGTTAAGGCAGAGTTGAAAAATGGGGTGCTGTATATCACCATTCCTAAGACCAAGGTTGAACGCAAGGTTATTGATGTGGAAGTTAAGTGA 696 0.4598 MAQALSTSSPLLSQKTGYSVKPQNNVIAPCMVSFPSRKELPKLGRVRAQASGDNKDNSVEVQHVSKGDQGTAVERKPRRTALDISPFGLLDPWSPMRSMRQILDTVDQIFEDTMTFPGRNVGGGEIRAPWDIKDEEHEIKMRFDMPGLSKEHVKVSVEDDVLVIKGGHKSEQEQGGDDSWSSRSYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVEVK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01470 231 Gene3D - 89 230 IPR008978 -
Pumo10g01470 231 CDD ACD_sHsps-like 131 218 - -
Pumo10g01470 231 Pfam Hsp20/alpha crystallin family 131 230 IPR002068 -
Pumo10g01470 231 FunFam 26.5 kDa heat shock protein, mitochondrial 88 230 - -
Pumo10g01470 231 SUPERFAMILY HSP20-like chaperones 110 228 IPR008978 -
Pumo10g01470 231 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 2 231 IPR044587 GO:0009408
Pumo10g01470 231 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 121 231 IPR002068 -
Pumo10g01470 231 MobiDBLite consensus disorder prediction 48 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01470 Pumo-Chr10 19590772 19592780 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01470 K13993 - gmx:548078 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01470 10 19590772 19592780 Pumo10g01470 10 19590772 19592780 ECH