Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01380 ATGACTAGTGGGAGTAACTGTATTCCAAACGGTCTCGTGTCTGGTAAAGCACCCTATGTTGCCAAGGTGCTTGACCAGAAAACATGGTCACAAGCTGAAGCTAGAGCTGCACAGCTGCTTGCACAAATTCAGCCCAACCATTCATCAGAAGCACATCGAAATGCTGTCGTTTCTTACCTACGATGCCTCATCATGAACTCTGTCCCTTGCCAGGTATTTACATTTGGGTCCGTACCGTTGAAGACCTACTTACCTGATGGGGATATTGATCTAACAGTGTTCAGTGATAATCAACATTCTGAAGACCGTATGATCCTAGATGTACTGAATATTTTAGAAAATGAAGTGAACAATGAGAATGCCGAGTTTCATGTCAAAGAGGTTCAGCCTATCCAGGCAGAGGTGAAGATTATAAAGTGTTTAATCGAAAACTTTGTAGTTGACATATCTTTCAATCAGATTGGTGGTTTAGGTACACTTTGTTTTCTTGAGGAGGTTGACAATTTGATAGAAGCAAATCATTTTTTCAAAAAAAGCATTATACTGATAAAAGCTTGGTGTTATTACGAGAGTCGCATTCTCGGATCTCACCACGGACTTATTTCAACCTATGGGTTAGAAATTTTAGTCATATATTTATTCAATGTTTTCAATAACACATTTGTTGGACCCCTTGAGGTACTTTTTCGATTTCTAGACTTCTTCAGTAAATTTGACTGGAGCAAGTATTGCATTGGCTTAAGGGGGCCGGTGCGTATTAAGTCACTTCCTAATATGAAAGCTGAGCCTCCACGATATGCACGTAAGAATTGTCCAGAATTGCTTCTAAGTGAAGAATTTCTCATTGCTTGTGAGTCCAACTACGGTGTTAAGCCTAGCACCCAAGAAATCAAAGGCAAACCTTTTGTTTGCAAACACCTCAACATTATTGATCCTTTGCGTGCTAACAATAACTTGGGGCGTAGCATCAATAAGGGTAACTTCTGTAGGATAAAAAGTGCAATTGCTTTGGGTGCTAAGCGAATAGAGAGGTTGCTGGCTTGCCCAGAAGATAACATTATAGCTGAATTTGATTTGTTCTTCAAGAATACGTGGGACAGAAACGGCAAAGGTTTCTGGATTGATACAGAAAGCTATAATCTGTATCTAAGGAATAATAATAATAATGTTACAACTAGCCAGGCTGAGCAGGCTCAAGCTTCTCCTGCTAACCATTCAGAAGAATCAAAGCAAATGTTTGGAACTTCTGATGTATTTGCTGCTTCTCAGACTTGGAGCTCGCCCTTTGATACCATGAACGATGCACTTGCTAATAGAGGCCAAAGTCCTATATATTCATCAAATGAAGTTCGTGACATGCATCCCTTTCCTGGGTTTTATGCTGGTTCAGAATTTTCTCATTTGTATAGTCAAGCTCCAACCCATCCTCACCACAACACCGGATTTTCATCTGAAATTCAGCAATCTTTTGGGCAGATTTCAGATGATTGGAGAAGTGAATATGCATTTGACCCAGAAAATACTTCAAGTGGTTATTATTATCAGTATGGCTTTGGTGTTGATGATGCAAATGTCTTTCCTGTTGATGAAGCAATGCTGATGCATCAAAAGGAGTTTGGTTATCCCAATTTCAATGAATATCTGCAAGCACCAGTGAATGTGAATTCAAGTGATGTATCTTTTCCACCACCACCACCACCACCCAATGTTTTAGCTTCAGGATACATGCATGAAAACTCATGTGGGGTGCTTCCAGAAAATTTCCCTTCTTTTGAGTCCTCTTCAGGCCACAATATGCCTTACTCTCACAACACAGCTCCATTTCCTTCAGAATGGTTTCCAGGTCGGAGATCGACATCCTATGAGGAAGAACATACTGAACCATTTGATTATAATGTGTCAGTACCTCATTCAGATCATCAAAGACAAATGGCTGTTAACATTGGTTCCAACTCTGGTAATCCATCTTGGCAGACTGGTGCTACAAGTTACACACCAAAAGATTATGGGGTAACTACTAACCAAAACAAAGGGAGTGAGAATCCACCTAGAGCAAGCTCTAGTTTCACACCTCCTTTGCCTCCAACCTCGAGGACCAACCTTTCTTCCTCTGATATCTCAACTGGTGATGTCAGTGGAAACTGGATTGGTCAATCAACTATAGGCACTGAATCAATTACTTCAAGAGTTCAAGCTCTTGAATTAGCTAGGGAACTGCCAATGACTGTGCCTAATTCATCCGTTCCTGATTACAGTACTCCTGTTCATGTTGATCCTCCTGGTTCAAGTCAGAGAGCTGTTGATAACCAAAATTTTCCACCAGTTGCAAGTGGTTCCTCTGGACCATCAGTTCAAGTTCCTACCTACAATCTTCCTACTGAGACTGAAAATATTTTTGCAGCCACCAATTATGATATATTGGATGGTGACTTTGCCACCTATTATATAAATCTACAGTATGGGAGGTTTTGTAAGAATTCAAAATCACAGGAGGCTTTGCCTCCCTTTGCTACACTGCCAACGCATTTAAGGGCACAATTTCCATGGCATGGGAAACCTAAAGGTGTCATGAACATTATGGAGCATGCTCATTCCCCAGTTCGAGTGATGCCACCTCGAGGTGCTTCTCCCTTGCATGGAGATACTAATGAACATGTTGGTTTTTGGCTTCCAAGATTTAGTGAAGGGACTGGGACTTACTTTCCAAAGCCTACTTCAAGTTGTTATTACCAGCCGAGGTTTTGGAGGAGAAAGCATCATCACCAAAATCGTTATATTGAAAATCCAAGATATGAAAGGAAGGATAACCATGGTGAAAGGGAACAAAATTCGTCTTTGAATTCAGAGAGAAGGTTTCCCAGCCGTGGCCACAAATTTGAGAATCCAGGTACAAATGAATCATCACATCAAGGTGAAAGCTCACATGGTGGTACTAGTAAGGTGCCAAATTTTGGAAGTGGAAAAGGCAGTGGGCTTGAGTTTGCTTTTCTTAAACCTATTCCTAATCTCATTGATGGGCATGAGCTTAATTGGGTGAACTTTGTCATTGATGCTTCGTCCAATCTGCATCTTTGGTGA 3078 0.4087 MTSGSNCIPNGLVSGKAPYVAKVLDQKTWSQAEARAAQLLAQIQPNHSSEAHRNAVVSYLRCLIMNSVPCQVFTFGSVPLKTYLPDGDIDLTVFSDNQHSEDRMILDVLNILENEVNNENAEFHVKEVQPIQAEVKIIKCLIENFVVDISFNQIGGLGTLCFLEEVDNLIEANHFFKKSIILIKAWCYYESRILGSHHGLISTYGLEILVIYLFNVFNNTFVGPLEVLFRFLDFFSKFDWSKYCIGLRGPVRIKSLPNMKAEPPRYARKNCPELLLSEEFLIACESNYGVKPSTQEIKGKPFVCKHLNIIDPLRANNNLGRSINKGNFCRIKSAIALGAKRIERLLACPEDNIIAEFDLFFKNTWDRNGKGFWIDTESYNLYLRNNNNNVTTSQAEQAQASPANHSEESKQMFGTSDVFAASQTWSSPFDTMNDALANRGQSPIYSSNEVRDMHPFPGFYAGSEFSHLYSQAPTHPHHNTGFSSEIQQSFGQISDDWRSEYAFDPENTSSGYYYQYGFGVDDANVFPVDEAMLMHQKEFGYPNFNEYLQAPVNVNSSDVSFPPPPPPPNVLASGYMHENSCGVLPENFPSFESSSGHNMPYSHNTAPFPSEWFPGRRSTSYEEEHTEPFDYNVSVPHSDHQRQMAVNIGSNSGNPSWQTGATSYTPKDYGVTTNQNKGSENPPRASSSFTPPLPPTSRTNLSSSDISTGDVSGNWIGQSTIGTESITSRVQALELARELPMTVPNSSVPDYSTPVHVDPPGSSQRAVDNQNFPPVASGSSGPSVQVPTYNLPTETENIFAATNYDILDGDFATYYINLQYGRFCKNSKSQEALPPFATLPTHLRAQFPWHGKPKGVMNIMEHAHSPVRVMPPRGASPLHGDTNEHVGFWLPRFSEGTGTYFPKPTSSCYYQPRFWRRKHHHQNRYIENPRYERKDNHGEREQNSSLNSERRFPSRGHKFENPGTNESSHQGESSHGGTSKVPNFGSGKGSGLEFAFLKPIPNLIDGHELNWVNFVIDASSNLHLW 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01380 1025 Coils Coil 109 129 - -
Pumo10g01380 1025 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 17 969 - -
Pumo10g01380 1025 Pfam Nucleotidyltransferase domain 71 141 IPR002934 GO:0016779
Pumo10g01380 1025 MobiDBLite consensus disorder prediction 646 708 - -
Pumo10g01380 1025 MobiDBLite consensus disorder prediction 960 985 - -
Pumo10g01380 1025 MobiDBLite consensus disorder prediction 926 957 - -
Pumo10g01380 1025 CDD NT_PAP_TUTase 52 157 - -
Pumo10g01380 1025 Gene3D - 156 355 - -
Pumo10g01380 1025 Gene3D Beta Polymerase, domain 2 45 155 IPR043519 -
Pumo10g01380 1025 MobiDBLite consensus disorder prediction 926 985 - -
Pumo10g01380 1025 SUPERFAMILY PAP/OAS1 substrate-binding domain 175 345 - -
Pumo10g01380 1025 SUPERFAMILY Nucleotidyltransferase 42 194 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01380 Pumo-Chr10 18325609 18330633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01380 - - ccaj:109797485 1132.86