Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01367 ATGGCGGATTCAGAGCGAATCCAAAATCCGTGGATGGCTTCGGAGCAAACTGCAATTGAAATGAACGGCGAGGGCACAGACTCCAGGGAACGTTCTTCTCTTCCTCCGCCGCCGCCGCCGCCCCCGCAAAAATCATCCAATTCTGATCAATTGGGAATCGGAGGACGAGCTTTCTCCGCCGCCGGCGCTGCCTTCTTCTCCGCCATCATTGTCAATCCCCTTGATGTTGCCAAGACAAGGTTGCAAGCACAAGCGGCAGGGGTCGCTTATTCTCATCCACTCAGTAATATGACCAGTAGAATGGCTTGTTTTGGGCCAAATATGATGTTTGCTGATTTAAGATGTTCTCCATCATGCCACCGAGCTGGAATCCAGGGCACGGTGTCCATTTGTCCTCCCGAGTGTTTTCGCTACAAGGGAACACTGGATGTTATCTGCAAAATTATTCAACAGGAGGGATTTTCTAGGCTATGGAGAGGCACAAATGCTGGCCTGGCTCTTGCAGTACCAACTGTGGGAATTTACCTTCCTTGCTATGACATATTCCGCAATTGGTTGGAGGAATTCACAGCTAAAAATGCACCAAGCACAACTACTTATGTACCTCTAGTGGCTGGTTCATTGGCACGCTCTCTAGCTTGTGCAACTTGCTACCCTATTGAACTTGCTAGAACTCGTATGCAGGCATTTAAAGAGATTCAAATTGGTAAAAAGCCTCCTGGAGTGATCCAGACTCTGCTAGGTGTTGTCTCACATGTCAAGAGCACAAACATTCCACAGAACAGCTTGCAAGGTTATCGTGTTCTGTGGACTGGCATGGGAGCTCAACTTGCTCGTGATGTACCCTTCTCTGCTATTTGTTGGTCGACACTTGAACCAACTAGAAGAAAACTTCTTGGTTTGATTGGAGGTGATGATGCCAATGCATTGAGTGTTCTTGGGGCAAATTTTGGAGCTGGTTTTGTTGCAGGAACTTTAGCAGCTGGAGCTACATGTCCACTAGATGTTGCAAAAACTCGAAGGCAGATAGAGAGGGATCCTGTTAGGGCATTGAAAATGACTACAAGGCAGACACTGATGGAGGTGTGGAGAGACGGAGGCTTGAGAGGATTGTTTACAGGTGTTGGTCCACGAGTTGGTCGAGCAGGCCCCTCCGTTGGAATTGTGATTTCATTTTATGAAGTTGTAAAGTTTGTTCTACATCATCGGTACACAGCATCATCATGA 1227 0.476 MADSERIQNPWMASEQTAIEMNGEGTDSRERSSLPPPPPPPPQKSSNSDQLGIGGRAFSAAGAAFFSAIIVNPLDVAKTRLQAQAAGVAYSHPLSNMTSRMACFGPNMMFADLRCSPSCHRAGIQGTVSICPPECFRYKGTLDVICKIIQQEGFSRLWRGTNAGLALAVPTVGIYLPCYDIFRNWLEEFTAKNAPSTTTYVPLVAGSLARSLACATCYPIELARTRMQAFKEIQIGKKPPGVIQTLLGVVSHVKSTNIPQNSLQGYRVLWTGMGAQLARDVPFSAICWSTLEPTRRKLLGLIGGDDANALSVLGANFGAGFVAGTLAAGATCPLDVAKTRRQIERDPVRALKMTTRQTLMEVWRDGGLRGLFTGVGPRVGRAGPSVGIVISFYEVVKFVLHHRYTASS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01367 408 Gene3D Mitochondrial carrier domain 37 104 IPR023395 -
Pumo10g01367 408 MobiDBLite consensus disorder prediction 9 23 - -
Pumo10g01367 408 MobiDBLite consensus disorder prediction 1 52 - -
Pumo10g01367 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 51 185 IPR018108 -
Pumo10g01367 408 SUPERFAMILY Mitochondrial carrier 56 395 IPR023395 -
Pumo10g01367 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 311 399 IPR018108 -
Pumo10g01367 408 PANTHER FI19922P1-RELATED 33 403 IPR045315 GO:1990542
Pumo10g01367 408 Gene3D Mitochondrial carrier domain 121 407 IPR023395 -
Pumo10g01367 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 197 297 IPR018108 -
Pumo10g01367 408 Pfam Mitochondrial carrier protein 315 401 IPR018108 -
Pumo10g01367 408 Pfam Mitochondrial carrier protein 198 298 IPR018108 -
Pumo10g01367 408 Pfam Mitochondrial carrier protein 52 187 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01367 Pumo-Chr10 18154618 18159917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01367 142 398 Organic Solute Cotransporters AT3G55640 26.616 4.49e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01367 K15119 - gmx:100778501 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01367 10 18154618 18159917 Pumo10g01367 10 18154618 18159917 ECH