Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01332 ATGTTCTCAAACTTGGCAGTTAAAGTGGTGACTGACTCAAGCTGGAAAAACCTTGTGATTGCAAGTGAGACCCCAGTCCTGGTAGAGTTTTGGGCACCATGGTGTGGTCCATGCAGGATGATAGCTCCTGTTATCGATGAGTTAGCAAAGGAGTATGCTGGAAAAATTGCATGCTACAAGCTTAACACAGATGATTCTCCAAACATAGCAACACAGTACGGCATCAGAAGCATACCAACAGTTCTGTTCTTCAAGAATGGAGAGAAAAAAGAAAGCATAATTGGTGCAGTTCCCAAGTCTACTCTGTCCGCAACAGTGGAAAAATATGTTGACTTATAA 339 0.4248 MFSNLAVKVVTDSSWKNLVIASETPVLVEFWAPWCGPCRMIAPVIDELAKEYAGKIACYKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSATVEKYVDL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01332 112 PANTHER GEO12009P1 10 110 - -
Pumo10g01332 112 Pfam Thioredoxin 7 107 IPR013766 -
Pumo10g01332 112 CDD TRX_family 19 107 - -
Pumo10g01332 112 SUPERFAMILY Thioredoxin-like 6 111 IPR036249 -
Pumo10g01332 112 ProSitePatterns Thioredoxin family active site. 27 45 IPR017937 -
Pumo10g01332 112 FunFam Thioredoxin 3 110 - -
Pumo10g01332 112 Gene3D Glutaredoxin 6 111 - -
Pumo10g01332 112 NCBIfam thioredoxin 11 109 IPR005746 GO:0015035
Pumo10g01332 112 ProSiteProfiles Thioredoxin domain profile. 1 111 IPR013766 -
Pumo10g01332 112 PRINTS Thioredoxin family signature 74 85 - -
Pumo10g01332 112 PRINTS Thioredoxin family signature 26 34 - -
Pumo10g01332 112 PRINTS Thioredoxin family signature 34 43 - -
Pumo10g01332 112 PIRSF Thioredoxin 4 110 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01332 Pumo-Chr10 17671621 17671959 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01332 K03671 - gmx:100500292 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01332 10 17671621 17671959 Pumo10g01332 10 17671621 17671959 ECH