Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01301 ATGCCTGGTGCTGACTACCAACTTGTCAAGCTCTTAGGTCTCAAACCATCCACCAAAAGGTTCATGTTATACCATCAAGGTTGCTTTGCTGGTGGCACCGTCCTTCGTCTCGCGAAAGATCTTGCCGAGAATAATGTTGGAGCACGTGTTCTCGTGGTATGTTCCGAGATCACAGTTGTTACATTTCGTGGACCCTCTGAAGCACACTTGGACTCGTTAGTGGGACAAGCTCTCTTTGGTGATGGTGCTTCATCCGTGATCGTTGGATCCGACCCTGACACATCCATCGAACGACCACTATTTCACCTTGTGGCGGCGTCAGAGACAATTCTACCCAACTCTGAGGGTGCAATTGAAGGACACTTGCGTGAGGTGGGACTCACGTTCCATCTCAAGGAAAATGTCCCACAATTGATTGGGGAGAACATAGAGAAAAGCCTTGAAGAAACCTTCCACCCACTCGGGATCAGTGATTGGAACTCATTGTTTTGGGTGACCCACCCTGGTGGCCCTGCAATCTTGAAGCAGATAGAGGCAACGCTTGGGTTGAACCCTGATAAACTGAGAGCAACTAAAGAGGTTCTAAGTGAGTACGGGAACATGTCAAGTGCATGTGTCCTGTTTATACTGGATGAGATGAGAAGGCGGTCCATGAAGGAAGGGAAATCCACTACTGGTCAAGGACTGAAGTGGGGTGTTTTATATGGTTTTGGCCCTGGCTTAACCATGGAGACCATTGCTTTGCATAGCGCCACTATAGACCCATGCAACTAG 774 0.4871 MPGADYQLVKLLGLKPSTKRFMLYHQGCFAGGTVLRLAKDLAENNVGARVLVVCSEITVVTFRGPSEAHLDSLVGQALFGDGASSVIVGSDPDTSIERPLFHLVAASETILPNSEGAIEGHLREVGLTFHLKENVPQLIGENIEKSLEETFHPLGISDWNSLFWVTHPGGPAILKQIEATLGLNPDKLRATKEVLSEYGNMSSACVLFILDEMRRRSMKEGKSTTGQGLKWGVLYGFGPGLTMETIALHSATIDPCN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01301 257 ProSitePatterns Chalcone and stilbene synthases active site. 20 36 IPR018088 GO:0009058|GO:0016746
Pumo10g01301 257 Gene3D - 1 99 IPR016039 GO:0016746
Pumo10g01301 257 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 1 251 IPR011141 GO:0009058|GO:0016747
Pumo10g01301 257 FunFam Chalcone synthase 1 100 252 - -
Pumo10g01301 257 Pfam Chalcone and stilbene synthases, N-terminal domain 1 92 IPR001099 -
Pumo10g01301 257 SUPERFAMILY Thiolase-like 1 97 IPR016039 GO:0016746
Pumo10g01301 257 Gene3D - 100 254 IPR016039 GO:0016746
Pumo10g01301 257 Pfam Chalcone and stilbene synthases, C-terminal domain 103 251 IPR012328 -
Pumo10g01301 257 CDD CHS_like 1 248 - -
Pumo10g01301 257 SUPERFAMILY Thiolase-like 99 249 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01301 Pumo-Chr10 17076272 17077045 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01301 K00660 - jre:108992049 419.468