Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01278 ATGAAGACACGCCACTTACTTCATCTGTGTGTAATAGTGTTACTGTTAGCCTTAGGCTGTGCAGCGGAGGAGGAGGCTTCCGCTTCCACTAGCATCATCTTCACCACACTTGGCCGAGCCTTCTACGCCTTCGACATCTATTCCCTCCCAATTCAGCAACAACAACCTCTCACTCTCACCGCAAGCCAAGAACTTCAACTCACCGATGGCCACTCCGTTAATTTCAACGGCCACTTCCTTTCCAACACCTCCGCTATTCAGCTCCCCAAACACTCCCCTTTGCTCCAACTCGTTTACGTAACGGAGAGAAACGGCTACCCCACCATATACTACGACGCCGTTTATACAAAAACCCAATCTGTTATCTCAAACAGAATCCAAATCCCTCTTTTAACGAACCAGCTCAGCGACGCTTCTTCTCAACTTTCCATTAAAGACAAGCCCAGCGTCACCCCCGACGGAGAATATTTAGTCTACGTATCCACCCACGAGAACCCCGATGTTCCACGGGCCAGTTGGGCCGCGGTTTACTCCACGCACCTCCAATCGGGCCTCACCCAAAGACTCACCCCATACGGTGTCGCAGACTTCAGCCCAGCCATCTCTCCCTCCGGTCTCTGGACCGCGGTCGCTTCCTACGGCCCGGACGGCTGGGCCGGCGAGGTAGAGGATCTCACCACAGACATCTACATCTTCCTCACTCGCGACGGAACTCAACGAGTCAAAATCGTCGAGCACGGAGGCTGGCCCACCTGGGTCGACGACCACACTCTCTACTTCCACCGGAGAGGCCAAGACCAGTGGTGGAGTATTTACAAAGCGACTCTCCCCTCCAACGGTGATCCCGTTTCCGTTGACTCGGTCCTCGTCGAACGAGTCACCCCACCGGGTCTCCACGCGTTCACACCAGCCACCTCCCCGGGCAACAACAACTTCATCGCCGTCGCAACCAGAAGGCCAGGCTCCAGTTTTCGCCACATCGAGCTATTCAACCTCGTTAATAACGAATTCACGGAACTGACTCGTTTGGTCTCGCCTCATTCTCACCACCTCAACCCGTTCATCTCGCCCGATTCAACCCGGGTCGGGTACCACAAGTGCAGAGGAGAACCCAACGCTCATAGCTCCCCCCAGTTCTTCCTCGAGAATGTTCGGAGCCCCGTCCCCGGTCTAACTCTCTTCCGGTTCGTCGGTTCTTTCCCGGTTTTCTCCCCCTCCGGTGACCGAATCGCCTACGTCGAGATGCCGGGAGTTTACGTCGTGAACCGGGACGGTTCGAACCTGCGTAAGGTTTCCGACGCGATGGCGTTTTCAACCGCTTGGGACCGGGTCCGACCCGGTGTAATCTACACCGCAATTGGAGAAACATTTGCTCCGGAGAGCTCGCAGGTTGATATCGTGTCCATCGACGTTGACAATGAAAACAGTGTGAAGAGGCTGACTCTGGACGGGAAGAACAACGCTTTTCCGTCACCCTCGCCGGACGGGAAATGGATGGTGTTCCGGTCGGGTCGGTCGGGTCATAAGAACCTTTACATAATAGACGCTGTTGACGGAGAGAGAAAGGAGCTTCGAAGATTAACGGAGGGTCCATGGACTGATACGATGTGTAACTGGTCACCGGATGGGGAATGGATTGCTTTTGCGTCGGACCGGCATGACCCGGGTAGTGGGAGCTTCGAGCTGTACCTGATCCACCCGAACGGAACCGGGTTGAGGAAACTGATCCAAAGCGGGTCGGGTGGGAGGACGAACCACCCGTATTTCAGCCCCGATGGGAAGAGTCTAACGTTTACTTCGGACTATGCGGGTATATCGGCTGAGCCAATCTCGAACCCGCATCACTACCAGCCATATGGTGAAATATTCACCGTTAGATTGGACGGTTCGGGGATCAAGAGGCTCACTCATAACTCGTATGAGGATGGAACTCCAGCTTGGTCGCCCAAGTATATGCCGCCGATGAATGTACCAAACGGGGGACCCTATTGCTCCTTTGAGGATTGTCATTGGCTCAACAATATGCCCAATTGGACTGGTTTGGGTGTGTCTAAGGCTCAGTGTGCTGCTCTGTAA 2076 0.5462 MKTRHLLHLCVIVLLLALGCAAEEEASASTSIIFTTLGRAFYAFDIYSLPIQQQQPLTLTASQELQLTDGHSVNFNGHFLSNTSAIQLPKHSPLLQLVYVTERNGYPTIYYDAVYTKTQSVISNRIQIPLLTNQLSDASSQLSIKDKPSVTPDGEYLVYVSTHENPDVPRASWAAVYSTHLQSGLTQRLTPYGVADFSPAISPSGLWTAVASYGPDGWAGEVEDLTTDIYIFLTRDGTQRVKIVEHGGWPTWVDDHTLYFHRRGQDQWWSIYKATLPSNGDPVSVDSVLVERVTPPGLHAFTPATSPGNNNFIAVATRRPGSSFRHIELFNLVNNEFTELTRLVSPHSHHLNPFISPDSTRVGYHKCRGEPNAHSSPQFFLENVRSPVPGLTLFRFVGSFPVFSPSGDRIAYVEMPGVYVVNRDGSNLRKVSDAMAFSTAWDRVRPGVIYTAIGETFAPESSQVDIVSIDVDNENSVKRLTLDGKNNAFPSPSPDGKWMVFRSGRSGHKNLYIIDAVDGERKELRRLTEGPWTDTMCNWSPDGEWIAFASDRHDPGSGSFELYLIHPNGTGLRKLIQSGSGGRTNHPYFSPDGKSLTFTSDYAGISAEPISNPHHYQPYGEIFTVRLDGSGIKRLTHNSYEDGTPAWSPKYMPPMNVPNGGPYCSFEDCHWLNNMPNWTGLGVSKAQCAAL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01278 691 SUPERFAMILY Tricorn protease N-terminal domain 399 649 - -
Pumo10g01278 691 SUPERFAMILY DPP6 N-terminal domain-like 148 482 - -
Pumo10g01278 691 Gene3D - 259 448 IPR011042 -
Pumo10g01278 691 Gene3D - 95 258 IPR011042 -
Pumo10g01278 691 Gene3D - 557 651 IPR011042 -
Pumo10g01278 691 Gene3D - 449 556 IPR011042 -
Pumo10g01278 691 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 10 672 - -
Pumo10g01278 691 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pumo10g01278 691 Pfam WD40-like Beta Propeller Repeat 148 164 IPR011659 -
Pumo10g01278 691 Pfam WD40-like Beta Propeller Repeat 584 601 IPR011659 -
Pumo10g01278 691 Pfam WD40-like Beta Propeller Repeat 478 513 IPR011659 -
Pumo10g01278 691 Pfam WD40-like Beta Propeller Repeat 525 563 IPR011659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01278 Pumo-Chr10 16796652 16799493 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01278 - - gmx:100791865 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01278 10 16796652 16799493 Pumo10g01278 10 16796652 16799493 ECH