Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01267 ATGGTCAACTACGTGTCGTCCCTGGGAACTCACGTGGGAGACGTTGGAGAGTTTCAGTTCCACGCTTTCCCTACTTTGGAACAGCTTTCCTCCGTCTCAGATCAACAACTCAGAGACGCCGGTTTCGGTTACAGGGCTAAATATATAATTGGCACGGTTAATGCTTTGCAATCAAAACCCGGTGGAGGGGAAGAATGGCTTCGCTCTCTTCGTAAAATGGAACTTCGAGATGTTATATCTGCCCTTTCTACGTTACCCGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTCTCGCTCGATCAGCACCATGCGGTTCCTGTTGACACACACGTGTGGCGGATTGCCACGAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACACCGAAGCTCTGTGATCGTGTTGCAGAGGCTTTTGTAACCAAGTATGGTAAATATGCTGGCTGGGCGCAGACTCTATTATTCATAGCTGAATTACCTTCACAAAAGGCCCTCCTACCTTCACATTTGTTGACTATTAAACAACGCAATGCTGCAAAGATAAAAGGCAGTGAAGAAGAAGTTGAGTGA 579 0.4767 MVNYVSSLGTHVGDVGEFQFHAFPTLEQLSSVSDQQLRDAGFGYRAKYIIGTVNALQSKPGGGEEWLRSLRKMELRDVISALSTLPGVGPKVAACIALFSLDQHHAVPVDTHVWRIATKYLLPELAGSQLTPKLCDRVAEAFVTKYGKYAGWAQTLLFIAELPSQKALLPSHLLTIKQRNAAKIKGSEEEVE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01267 192 SMART endo3end 10 162 IPR003265 GO:0006284
Pumo10g01267 192 FunFam N-glycosylase/DNA lyase OGG1 100 162 - -
Pumo10g01267 192 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 1 183 - -
Pumo10g01267 192 Pfam HhH-GPD superfamily base excision DNA repair protein 19 120 IPR003265 GO:0006284
Pumo10g01267 192 Gene3D - 100 163 IPR023170 -
Pumo10g01267 192 CDD ENDO3c 21 159 IPR003265 GO:0006284
Pumo10g01267 192 Gene3D Hypothetical protein; domain 2 1 99 - -
Pumo10g01267 192 SUPERFAMILY DNA-glycosylase 6 160 IPR011257 GO:0003824|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01267 K03660 - gmx:100789749 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01267 10 16706648 16707551 Pumo10g01267 10 16706648 16707551 ECH