Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01263 ATGAAATTCCTTAACTCGATCCTACTCTTCTCAATCGTTCTCGCAGCAGCCTCGGCGGCGGTTTCAGTCGCGGAGCCGATTCCCTCCGCCGCATACGACCGCGTGCTGTTCCAGGACCACCGGTGCCAGAAGGCGGTGTCGGAGAACAAGACGCGGCGAGGCTCCTCTGCGGCGGCGACGGCGGAGTGCGAGGTGTGGAGCGAGGCGTGTTCGGAGGCGGTGCTGAGCGTGGCGCGGCGGCCGGAGACGGCGGAGTGGTTGAAGAAGATTCGGCGGAAGATCCACGCGAATCCGGAGCTGGCGTTTGAGGAAACCGAGACGAGTCGTTTGATAAGAGAAGAGTTGGATCTGATGGAAGTTAGTTATCGGTACCCTCTCGCCAAGACCGGTATTCGAGCCTGGATCGGCACTGGGGGTCCGCCTTTTGTTGCGATCAGAGCTGACATGGACGCACTTCCCATCCAGGAAGCTGTGGAATGGGAGTACAAGTCCAAAGTCGCCGGCAAAATGCATGCTTGTGGGCACGACGCACATGTGGCTATGCTTATCGGCGCTGCCAAGATCTTGAAAACTCGAGAGCATTTATTAAAGGGAACTGTAATTCTGTTATTCCAGCCAGCAGAGGAAGCTGGTAATGGAGCAAAAAGAATGATGCAAGACGGTGCTTTGGAGGACGTGGAGGCTATATTTGCAGTTCATGTATCCCATGAACATCCAACTGGTATAATTGGCTCAAGGCCTGGACCCCTCCTTGCTGGCTGTGGATTTTTCAGAGCTGTCATTAGTGGCAAAAAGGGCCTTGCTGCCAATCCTCACCGTTCTGTTGATCCAGTCTTGGCTGCTTCAGCTGCAGTTATCAGCTTACAGGGTATTGTCTCCCGCGAAGCAAATCCATTGGATTCTCAGGTTGTCTCTGTAACTTCGTTTAATGGTGGCAACAATCTTGACTTGATACCCGACACAGTGGTCCTCGGTGGGACTTTCAGGGCCTTCTCTAACACCAGCTTTTACCAGCTACTTGAAAGAATAGAGCAGGTGATTGTGGAACAGGCGAGTGTCTACAGATGCTTTGCAGAAGTTGACTTCTTTGAAAAGGAGTACACTATTTATCCTCCCACAGTTAATGATGACCAAATGTATGAGCATGTGAAGAAGGTGTCCATTGATTTGCTGGGACAGAAGAATTTCAGGGTAGTTCCACCTATGATGGGTGCTGAAGATTTTTCTTTCTACTCCGAGGTGGTTCCCTCAGCTTTCTTCTACATAGGGATAAGGAATAAAACACTGGGGTCTACTCATACGGGACACTCTCCATATTTCATGATTGATGAAGACGTTCTACCAATAGGTGCTGCTGCTCATGCTAGTATTGCAGAGAGGTACCTCATTGAACATGGTTGA 1401 0.5096 MKFLNSILLFSIVLAAASAAVSVAEPIPSAAYDRVLFQDHRCQKAVSENKTRRGSSAAATAECEVWSEACSEAVLSVARRPETAEWLKKIRRKIHANPELAFEETETSRLIREELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMMQDGALEDVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGKKGLAANPHRSVDPVLAASAAVISLQGIVSREANPLDSQVVSVTSFNGGNNLDLIPDTVVLGGTFRAFSNTSFYQLLERIEQVIVEQASVYRCFAEVDFFEKEYTIYPPTVNDDQMYEHVKKVSIDLLGQKNFRVVPPMMGAEDFSFYSEVVPSAFFYIGIRNKTLGSTHTGHSPYFMIDEDVLPIGAAAHASIAERYLIEHG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01263 466 Pfam Peptidase dimerisation domain 257 351 IPR011650 -
Pumo10g01263 466 SUPERFAMILY Bacterial exopeptidase dimerisation domain 253 362 IPR036264 -
Pumo10g01263 466 NCBIfam amidohydrolase 89 450 IPR017439 GO:0016787
Pumo10g01263 466 Gene3D Zn peptidases 89 447 - -
Pumo10g01263 466 Gene3D - 252 370 - -
Pumo10g01263 466 PIRSF Amidohydrol_AmhX 75 465 IPR017439 GO:0016787
Pumo10g01263 466 CDD M20_IAA_Hyd 87 462 IPR044757 GO:0009850|GO:0016787
Pumo10g01263 466 FunFam N-acetyldiaminopimelate deacetylase 252 370 - -
Pumo10g01263 466 SUPERFAMILY Zn-dependent exopeptidases 82 464 - -
Pumo10g01263 466 Pfam Peptidase family M20/M25/M40 144 459 IPR002933 GO:0016787
Pumo10g01263 466 PANTHER PEPTIDASE M20 FAMILY MEMBER 67 465 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01263 Pumo-Chr10 16604993 16613091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01263 K21604 - gmx:100800794 843.188