Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01260 ATGGCGTGTAGGGTTTCGACCTGCTTCTTCTTCGTGTTTGCTCTTTCTCTCCTTCTTCCTTTTCAGATCTCTGCTGAGGAATCATCGGAGGCCAAGGAGTTCGTACTCACATTGGATCACACTAACTTCCATGACACTATCAGCAAGCACGACTTCATCGTCGTCGAGTTCTACGCACCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCACGATCCTCCAGTTGTTTTGGCTAAAATTGATGCCAATGATGAGAAGAACAGAGAGCTTGCATCACAATATGATGTTAGGGGATTCCCAACAATTAAGATTCTGAGAGATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTCATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTTCCAAAATTTTCTGGGGAGGAGTTTGATAACTTTACTGCCTTAGCAGAGAAGTTGCGTTCTGACTATGACTTTGGTCACACTCTGAATGCCAAACACCTTCCAAAAGGAGAGTCATCAGTTTCTGGGCCCGTAGTTAGGTTATTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCCATGTGGAAGCTCTAGAGAAATTTGTTGAGGAATCTAGTATCCCTGTTGTTACTGTCTTCAACAATGATCCAAGCAATCACCCTTTTGTTGTCAAATTCTTCAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAATATAAAAAACAGGGTGTAAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAGGAAGAACAAGTACCTCTAATTATCATACAACATAATGACGGGAAAAAATTTTTTAAACCCAATTTGGAAGCTGATCACGTTACAACTTGGTTGAAGGCATACAAGGATGGTAATGTTGCACCATATGTGAAATCTGAACCCATTCCTGAAACTAACGATGAACCTGTTAAAGTTGTAGTTGGGGACAGTCTCGAGGACATTGTTTTCAAATCTGGGAAGAATGTTCTGCTGGAGTTTTATGCTCCCTGGTGTGGTCATTGCAAACAGTTGGCTCCAATATTGGACGAAGTTGCTATCTCATATCAAAGTGATGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAATGATATCCCAAGTGAAACCTTTGATGTCCAAGGTTATCCAACCCTGTACTTCAGGTCAGCAAGTGGAAAGCTATCACAATACGAAGGTGGTCGGACCAAGGAAGACATCATAGAATACATCGAAAAGAACCGGGACAAACCTGCTCAGCAAGAACAAGGACAAGATAAACCTGCTCAGCAAGAACAAGTTAAAGAGGAGCAAGAAAAAGGAAAAGATGAGCTTTGA 1545 0.4188 MACRVSTCFFFVFALSLLLPFQISAEESSEAKEFVLTLDHTNFHDTISKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKIDANDEKNRELASQYDVRGFPTIKILRDGGKNVQEYKGPREADGIVDYLKKQSGPASTEIKSADEATAFIGENKVAIVGVFPKFSGEEFDNFTALAEKLRSDYDFGHTLNAKHLPKGESSVSGPVVRLFKPFDELFVDFQDFHVEALEKFVEESSIPVVTVFNNDPSNHPFVVKFFNSPNAKAMLFINFTAEGAESFKSKYREAAEQYKKQGVSFLVGDVESSQGAFQYFGLKEEQVPLIIIQHNDGKKFFKPNLEADHVTTWLKAYKDGNVAPYVKSEPIPETNDEPVKVVVGDSLEDIVFKSGKNVLLEFYAPWCGHCKQLAPILDEVAISYQSDADVVIAKLDATANDIPSETFDVQGYPTLYFRSASGKLSQYEGGRTKEDIIEYIEKNRDKPAQQEQGQDKPAQQEQVKEEQEKGKDEL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01260 514 ProSitePatterns Thioredoxin family active site. 399 417 IPR017937 -
Pumo10g01260 514 ProSiteProfiles Thioredoxin domain profile. 15 144 IPR013766 -
Pumo10g01260 514 SUPERFAMILY Thioredoxin-like 35 145 IPR036249 -
Pumo10g01260 514 PANTHER PROTEIN DISULFIDE ISOMERASE 11 512 - -
Pumo10g01260 514 MobiDBLite consensus disorder prediction 481 514 - -
Pumo10g01260 514 FunFam Protein disulfide-isomerase 23 142 - -
Pumo10g01260 514 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Pumo10g01260 514 MobiDBLite consensus disorder prediction 498 514 - -
Pumo10g01260 514 CDD PDI_a_family 36 139 - -
Pumo10g01260 514 Gene3D Glutaredoxin 143 247 - -
Pumo10g01260 514 FunFam Protein disulfide-isomerase 374 487 - -
Pumo10g01260 514 NCBIfam protein disulfide-isomerase 35 514 IPR005792 GO:0003756
Pumo10g01260 514 ProSiteProfiles Thioredoxin domain profile. 357 485 IPR013766 -
Pumo10g01260 514 Gene3D Glutaredoxin 22 142 - -
Pumo10g01260 514 SUPERFAMILY Thioredoxin-like 244 376 IPR036249 -
Pumo10g01260 514 SUPERFAMILY Thioredoxin-like 345 484 IPR036249 -
Pumo10g01260 514 SUPERFAMILY Thioredoxin-like 148 247 IPR036249 -
Pumo10g01260 514 Pfam Thioredoxin 35 141 IPR013766 -
Pumo10g01260 514 Pfam Thioredoxin 380 482 IPR013766 -
Pumo10g01260 514 CDD PDI_a_PDI_a'_C 378 480 - -
Pumo10g01260 514 FunFam Protein disulfide-isomerase 143 243 - -
Pumo10g01260 514 Gene3D Glutaredoxin 374 487 - -
Pumo10g01260 514 CDD PDI_b_family 147 243 - -
Pumo10g01260 514 Gene3D Glutaredoxin 248 373 - -
Pumo10g01260 514 FunFam Protein disulfide-isomerase 244 373 - -
Pumo10g01260 514 CDD PDI_b'_family 262 358 - -
Pumo10g01260 514 Pfam Thioredoxin-like domain 171 355 - -
Pumo10g01260 514 NCBIfam protein disulfide-isomerase domain 384 483 IPR005788 GO:0003756
Pumo10g01260 514 NCBIfam protein disulfide-isomerase domain 40 142 IPR005788 GO:0003756
Pumo10g01260 514 PRINTS Thioredoxin family signature 53 61 - -
Pumo10g01260 514 PRINTS Thioredoxin family signature 61 70 - -
Pumo10g01260 514 PRINTS Thioredoxin family signature 106 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01260 Pumo-Chr10 16569370 16573773 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01260 K09580 - gmx:100170705 980.319