Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01258 ATGGGCTGCGGCGAGTCCAAGTTGGAGGACTCCCACGCGGTGGCTCTGTGCAGAGAGCGGAAGGCGTTCCTAAAAGCCGCATCGGAGCAACGCTACGCGCTCGCCGCGGTACACGTGGCGTATTTCCATTCGCTGAGAGAAATCGGCGACGCGCTTCGCAAGTTCGCGGAGCAAGACCTCACCACAACAACAACCGGTTCCTCCTCTCCGGTTCTCACATTACCGTCCGAAACCAAAAGCATCAACAACAACAACAAATTCTCATCCTCTTCGCCTTCCATTTCTCACGCCGATTCCCCCGAGGGTTCTCACTTGCCCCTATCCTCTGGATCCGAATTGAGTTCCCCTTCTCCTTCTCATATTCACGATTCCCCAGAACCCGACCCGCCTCCTTACGGGTACTATCAAAATTACCATGACGCACACTACATGAAGAGGTCTGTCCCTCATGGGAAGCCCATGGTTTATGAAGAGCCCGAGAGACACGTTGCAACATTTGGACAATGGCCCGATCCTTCTTACGGCTTCTACGGTGGGGATTACCCGTACTACCCTCCACCTGGACCGTCGTCTTCTCCGCCGCGTCCTCCTCCGGCGCCGCCGTCTCCTCCTAGCGTCTCCACCTGGGACTTCCTCAACGTCTTCGACAACTTCGATAATGGTTACCCGGGTTACCCCCCTCGGTTCGGGTCGAGCGCGAGCAGCCCCGATTCGAAGGAAGTGAGGGAGAGAGAGGGGATTCCCGAATTGGAAGACGAAACGGAACACGAAACGATGAAAGAGGTTCCGTTGAAGGAGAAGAAAAAGATGGGAGAGGAAAAGGGTTTTGGAGTTAGGGATTTCGGGGAGGGGCCTTCGAACTCCAAAACGGTGCCGTTGCAGCAAGTGAGTAGCAGCGAGGGGAGTTCCAAGACGGTGAGGTTCCATGACGGCAGCGATAACGGTTCCCTTGAGAAAGAGATTAAGAGCAGTCCCGACACTGTTGCTTCCGAAGAGCGTGGTGCGAAGAAAGGGGTGAGTTTCGAGATTGACGAGGCCACGGTTACGACGCTGGATGGCGACTCTTCCGTTTTGAGTAGCGTCACCACTTTGTCCGCGCATGGCACCAGGGATCTCCGCGAGGTTGTTCAGGAGATTCAGGATGAGTTTCTGACGGCGTCGAATTTTGGGAAGGAGGTTGCGGTGTTGCTTGAGGTTTGCAAACCGCCATATCGATCCAGGGTTGCTGCACTTAGAGTTATCTTTTCCAGAATCTTGAAGATGGTAGCACCTTCCAGGCCACCTTCAGATCCTCTATCTATACAATTTTCTTCTAGGGAAATAAAATTGGCACAAGCATACTGTGGGGAACCTGGGAAAGACTTCAAGACAAATCCAGAAAACCTTTCATCCACATTGGAGAAACTTTATGCATGGGAGAAGAAATTGTATAAGGAAGTTAAGGATGAAGAGAGGTTACGAGCTATTTATGAGAAAAAGTTCAAGAGACTGAAAACATTGGATAATCTAGGAGCTGAATCTAGTAAAATAGATGCTACTAGGGCATCAATAAGGAAGTTGCAAACAAAAATCAATATTTGCATCAGAACTGCTGAAACTATAATGGGAAGAATACATAAATTGAGGGATAATGAATTGCAGCCTCAACTTGCAGCATTGATTAATGGATTCATAAGAATGTGGAAATTCATGCTCAAATGCCACCAGAAACAGTTCCAAGCTATCATGGAGAGTAAAAGTCAGTCTCTTAAGATTAACATGGGTCTGCAAGGAGATGAAGGTTTGAAGGCCGTTGTAGAACTTGAAAAGGAGCTTTTGAATTGGTGCAGTCAGTTCAACAATTGGGTTAAGACTCAAAAATCTTATGTCAAGAATTTGAATGAGTGGCTCATAAGGTGCCTTCCTAATGAACCTGAAGAAACAGCTGATGGTATTGCCCCTTTCTCTCCAAGTCGGCTTGATGCTCCACCAGTTTTTATAATTTGCAATGATTGGAATCACGCAATGAGTAGAATTTCAGAAACAGGGGTGGCAGAGACCATGCATGAATTTGCTCTAAAACTACATGAGTTATGGGAAAGGCAAGATGAAGCACAACGCCAGAGAATCAAAGCAGAGTATCTTAGAAAGGACTTTGAGAAACAGCTTAGAACTTTGCGCACAGAAATGGGAGGCTTAGAACATGAGCATGATAAAGTTTCGGGAAAGATTGCATTGTCAAAGCATGCTTCTGATAGTGGTGTTTCACCACTAGATGATCTAAAAGTGGATTTAGATTCTATGAAGAAGAAATTGCATGAAGAGAGGGCCAGGCATAAAGAAGCCATCAAACTTGTTCGTGATGCAGCTAATAATAGTTTACAAGCTGGTTTGATTCCCATTTTTAAGACATTAGAGAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAACAAGTCAGGCTTCAAAATGCTGGGGATTCGTAG 2463 0.4722 MGCGESKLEDSHAVALCRERKAFLKAASEQRYALAAVHVAYFHSLREIGDALRKFAEQDLTTTTTGSSSPVLTLPSETKSINNNNKFSSSSPSISHADSPEGSHLPLSSGSELSSPSPSHIHDSPEPDPPPYGYYQNYHDAHYMKRSVPHGKPMVYEEPERHVATFGQWPDPSYGFYGGDYPYYPPPGPSSSPPRPPPAPPSPPSVSTWDFLNVFDNFDNGYPGYPPRFGSSASSPDSKEVREREGIPELEDETEHETMKEVPLKEKKKMGEEKGFGVRDFGEGPSNSKTVPLQQVSSSEGSSKTVRFHDGSDNGSLEKEIKSSPDTVASEERGAKKGVSFEIDEATVTTLDGDSSVLSSVTTLSAHGTRDLREVVQEIQDEFLTASNFGKEVAVLLEVCKPPYRSRVAALRVIFSRILKMVAPSRPPSDPLSIQFSSREIKLAQAYCGEPGKDFKTNPENLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKKFKRLKTLDNLGAESSKIDATRASIRKLQTKINICIRTAETIMGRIHKLRDNELQPQLAALINGFIRMWKFMLKCHQKQFQAIMESKSQSLKINMGLQGDEGLKAVVELEKELLNWCSQFNNWVKTQKSYVKNLNEWLIRCLPNEPEETADGIAPFSPSRLDAPPVFIICNDWNHAMSRISETGVAETMHEFALKLHELWERQDEAQRQRIKAEYLRKDFEKQLRTLRTEMGGLEHEHDKVSGKIALSKHASDSGVSPLDDLKVDLDSMKKKLHEERARHKEAIKLVRDAANNSLQAGLIPIFKTLESFTSEVVKAHEQVRLQNAGDS 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01258 820 PANTHER UNCHARACTERIZED 1 814 - -
Pumo10g01258 820 Coils Coil 709 729 - -
Pumo10g01258 820 Coils Coil 751 778 - -
Pumo10g01258 820 Pfam Protein of unknown function (DUF632) 372 689 IPR006867 -
Pumo10g01258 820 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Pumo10g01258 820 MobiDBLite consensus disorder prediction 61 121 - -
Pumo10g01258 820 MobiDBLite consensus disorder prediction 222 335 - -
Pumo10g01258 820 MobiDBLite consensus disorder prediction 287 310 - -
Pumo10g01258 820 MobiDBLite consensus disorder prediction 237 279 - -
Pumo10g01258 820 SUPERFAMILY Tropomyosin 678 769 - -
Pumo10g01258 820 MobiDBLite consensus disorder prediction 180 209 - -
Pumo10g01258 820 MobiDBLite consensus disorder prediction 61 137 - -
Pumo10g01258 820 MobiDBLite consensus disorder prediction 311 335 - -
Pumo10g01258 820 MobiDBLite consensus disorder prediction 182 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01258 Pumo-Chr10 16539603 16546595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01258 1 755 Acyl Lipid Metabolism Gene Families AT2G27090 26.474 4.98e-57 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01258 - - gmx:100782069 1338.94