Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01256 ATGGTGGGCATTACCTGCGTGTTTGGCATAAACTCCATACGTGGCCTCTGCAAAGCATACAAATCCTTTATCACAAGATGGTTTCGTCGTAACAAGAAATCATCATCATCATCCTCTACCAGAGATAACCCACAACGCCGGAAACAAACACAACAGGAACCTATTCAACGTGACAAATCCACGAATGGAATTCAGTGCTTTAGATTGAGTTGTGGTGATGATGATGATGATGATCCAATGAGTTCAAGAGGATGTTGTTTATGTAGGCATAGAAGCTTAGATAATTCTTCGTGTTTTCCTTCCATAAATTCTGGGTCTAGAAATGCAAGCAGAAAGAATAATCGCCCCTCAAGCAAGAGCTACGATTTTATGCCTACTCCTTCTTCTTCTTCATGGAACCACAGTGGAAGTTTCAAAATGCCTCCTAATCTGAACTCACGGAATGCCAGCCGCAGGAAAGACACTCCGATCATGTATTCCAATTCATCTGGGATGCTAAAACCCCCACCAATTGAGAAAAAACTAGAATGCACTCTGGAAGACTTGTGCTATGGATGCAAGAAAAAGATCATGATCACAAGGGATGTCCTCACAGATACAGGGGGAATAGTTCAAGAGGAAGAACTGTTAACGATAAATGTACAACCTGGATGGAGGAAAGGAACAACGATTACATTTGAAGGAAAAGGGAATGAGAGACCAGGTGCATACAGAGAAGATATAATATTTATCATCTCGGAGAAAAGACACCAGTTATTTAGAAGAGAAGGGGATGATTTGGAACTGGGTGTAGAAATTCCCTTGTCAAAGGCACTTACCGGGTGCACAATAGTAGTCCCACTATTGGGTGGAGAGCACATGAATTTGACCCTTGACAATATCGTACACCCTGGCTATGAGAAGATCATCCCTGGCCAAGGCATGCCAATCTCCAGAGAACCAGGCAAGAGAGGAAACTTGAAAATTACATTTCTAGTTGAGTTTCCAACAAAACTCACACGTAATCAAAGATCAGAGGTTGTTCGTATTTTACAGAATTCCTGA 1044 0.4186 MVGITCVFGINSIRGLCKAYKSFITRWFRRNKKSSSSSSTRDNPQRRKQTQQEPIQRDKSTNGIQCFRLSCGDDDDDDPMSSRGCCLCRHRSLDNSSCFPSINSGSRNASRKNNRPSSKSYDFMPTPSSSSWNHSGSFKMPPNLNSRNASRRKDTPIMYSNSSGMLKPPPIEKKLECTLEDLCYGCKKKIMITRDVLTDTGGIVQEEELLTINVQPGWRKGTTITFEGKGNERPGAYREDIIFIISEKRHQLFRREGDDLELGVEIPLSKALTGCTIVVPLLGGEHMNLTLDNIVHPGYEKIIPGQGMPISREPGKRGNLKITFLVEFPTKLTRNQRSEVVRILQNS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01256 347 MobiDBLite consensus disorder prediction 33 59 - -
Pumo10g01256 347 MobiDBLite consensus disorder prediction 104 165 - -
Pumo10g01256 347 FunFam Dnaj homolog subfamily b member 167 248 - -
Pumo10g01256 347 Gene3D - 250 330 - -
Pumo10g01256 347 FunFam DnaJ subfamily B member 13 250 330 - -
Pumo10g01256 347 CDD DnaJ_C 169 332 - -
Pumo10g01256 347 Pfam DnaJ C terminal domain 171 329 IPR002939 -
Pumo10g01256 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 170 250 IPR008971 GO:0006457|GO:0051082
Pumo10g01256 347 MobiDBLite consensus disorder prediction 104 162 - -
Pumo10g01256 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 253 338 IPR008971 GO:0006457|GO:0051082
Pumo10g01256 347 Gene3D - 167 249 - -
Pumo10g01256 347 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 15 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01256 Pumo-Chr10 16483110 16485217 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01256 K09519 - gmx:100782604 565.074