Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01244 ATGGCACAAACCATGTTGCTCATGTCTAGTGTCTCTAGCAGTTATTCCGTGGATTTGAAGAAAGACCTTTTCCTCCAATTTCAGAGTCAAAGATTAAGGCCTAAGTTCGCTCAACTCTCATTCAGCCCACTTCCATCATCAAGTTCTTCCTTTTCTTCACCCCGTACATTCACAACTTTGGCTCTCTTCAAATCAAAGACCAAAGCCCCTCCTGCTAAGACTAAGGTTACAAAGCCAAAGCAAAAGGTTGAAGATGGTATCTTTGGCACTTCTGGAGGATTTGGTTTTACTAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCTATGCTTGGTTTTGCAGCATCACTGTTGGGTGAAGGAATAACTGGGAAAGGAATTCTAGCACAATTGAATCTGGAAACTGGAATTCCCATTTATGAAGCGGAACCTCTTCTTCTGTTTTTCATCCTCTTTACCCTGCTAGGAGCTATTGGAGGTTTAGGTGACCGTGGAAAATTCGTTGATGACGAACCTACTACTGGAGGTGTTATTCCTCCAGGCAAAGGCTTCAGGGAAGCTCTTGGTCTCGGTTCAGGTCCTTTGTTTGGATTCACGAAATCGAACGAGCTGTTTGTGGGAAGATTGGCTCAATTGGGTTTCGTGTTCTCTTTGATTGGAGAAATTATTACCGGAAAGGGAGCTCTAGCCCAACTCAACATTGAGACTGGGGTACCAATCAATGAAATCGAGCCCCTAGTGTTGTTCAACGTTCTCTTCTTCTTCGTTGCTGCTTTGAATCCTGGAACTGGCAAATTCGTTACAGATGAGGAGAATGATGATTAG 822 0.4392 MAQTMLLMSSVSSSYSVDLKKDLFLQFQSQRLRPKFAQLSFSPLPSSSSSFSSPRTFTTLALFKSKTKAPPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEPTTGGVIPPGKGFREALGLGSGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFVAALNPGTGKFVTDEENDD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01244 273 FunFam Photosystem II 22 kDa protein, chloroplastic 56 140 - -
Pumo10g01244 273 FunFam Photosystem II 22 kDa protein, chloroplastic 141 242 - -
Pumo10g01244 273 SUPERFAMILY Chlorophyll a-b binding protein 80 251 - -
Pumo10g01244 273 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 75 134 - -
Pumo10g01244 273 Gene3D Chlorophyll a/b binding protein domain 137 243 - -
Pumo10g01244 273 Gene3D Chlorophyll a/b binding protein domain 51 136 - -
Pumo10g01244 273 Pfam Chlorophyll A-B binding protein 66 217 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01244 Pumo-Chr10 16354559 16356496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01244 K03542 - gmx:100807355 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01244 10 16354559 16356496 Pumo10g01244 10 16354559 16356496 ECH