Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01241 ATGAACCCCTACATTGTCGGCCTCGTGATTCCGCTCATCGTCCTCCTCTACCGCAACCGCAACTCCAACAAGCGCCGCGGCCTCCCCGCCGACGCCGGCGGTGAGCCCGGCCTCTCGCTGCGGAACCACCGCTTCGGCTCGCCGCTCAGCTCGGCTTGGGAGGGCGTCACCACGCTCGCGGAGCTCTTCGAGCGCGCATGCAGGGAGCACCAGGAGCGCGTGCTGCTCGGCACGCGCGTGCTCCTCTCGCGTGAGATGGAGACCTCTCCCGACGGTAGAACCTTCGAGAAGCTTGACCTCGGGGACTACCAGTGGCTCACCTACGGGAAAGTCTTCGAATCCGTCTCGAGTTTCGCGTCCGGTTTGGCGTCGCTCGGGCATCGCAGGGAAGAGCGCGTGGCTATCTTCGCTGACACCAGAGAACGATGGTTCATTGCGCTGCAGGGTTGCTTCCGGAGGAATGCGACGGTTGTGACTATATATTCGTCGTTGGGAGAGGAAGCTTTGTGTCACTCATTGAATGAGACAGAGGTTACAACTGTGATTTGTGGGCGCAAAGAATTGAAATCACTAGTAAATATTAGTGGTCAACTTGACTCAGTGAAACGTGTGATATGCATGGACGACGATATCCCATCTGATGCCTCGTCTGCTCAGCATGGCTGGAAAATCACTTCCTTTAATGACGTTGAGAGGCTTGGTAGAGAAAATCCTGTTGAGGCTGATTTACCCCTTTCAGCGGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGATTGCCTAAGGGTGTGATGATGACACATGGCAATGTCTTGGCAACAGTCTCCTCTGTAATGATAATAGTTCCTAACCTTGGGCCAAAGGATGTCTATCTAGCATACTTACCGATGGCTCATATCCTTGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGAGGTTGTATAGGATATGGATCTCCTTTGACTTTAACTGATACTTCAAACAAAATAAAAAAGGGGAAACAGGGGGATGCCACTGCACTGATGCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGTGAGGGAGTGCTCAAGAAGGTAAATGCAAAGGGAGGATTGTCAAAGAAATTGTTTTATTTAGCCTATGCACGAAGGTTGCAAGCAATTAATGGTAGCTGGTTTGGTGCTTGGGGCTTGGAAAGAGCTCTATGGAATCTTCTTGTGTTCAAAAAGGTTCAAGCAATTTTGGGTGGTCGCATCCGGTTTATACTGTGTGGTGGTGCTCCCCTTTCTGGTGATACCCAAAGATTCATCAATATTTGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTCACAGAGACTTGTGCTGGTGGGTCATTCTCTGATTTCGACGATACATCTGTTGGCCGTGTTGGGCCACCTGTTCCTTGCTCATATATTAAGCTAATTGACTGGCCTGAAGGTGGATATTCAACTAATGACCAACCGATGCCCCGTGGTGAAATTGTAATTGGTGGTCCAAATGTCACTCTTGGGTACTTCAAAAATGAAGAAAAAACAAGAGAATCTTACAAGGTTGATGAAAAAGGAATGAGGTGGTTCTACACTGGTGACATAGGGAGATTTCATAAAGATGGTTGCCTTGAGATCATTGATCGGAAAAAGGACATAGTTAAACTACAGCATGGAGAATATGTGTCCTTGGGAAAGGTTGAGGCAGCTCTTTTTGCCAGTCCCTTCGTAGACAATATCATGTTGCATGCTGATCCTTTTCATAGCTACTGTGTGGCACTCGTGATAGTTTCTCATCCCACATTGGAGCAATGGGCTTCAAAGCAAGGAATTGCTTATTCTGATCTTTCAGAACTGTGCAGCAAAGAAGAAACTGTGAAGGAGGCACATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTTTGGAAAAATTTGAGATTCCTGCAAAAATTAAGTTGCTTTCTGAACCATGGACTCCTGAATCTGGCCTAGTCACTGCAGCTCTTAAGCTCAAGAGAGAGATAATTAGAAAGACTTTTCAAGCAGAGCTCTCGGAGTTATATGCCTCGTAG 2085 0.4777 MNPYIVGLVIPLIVLLYRNRNSNKRRGLPADAGGEPGLSLRNHRFGSPLSSAWEGVTTLAELFERACREHQERVLLGTRVLLSREMETSPDGRTFEKLDLGDYQWLTYGKVFESVSSFASGLASLGHRREERVAIFADTRERWFIALQGCFRRNATVVTIYSSLGEEALCHSLNETEVTTVICGRKELKSLVNISGQLDSVKRVICMDDDIPSDASSAQHGWKITSFNDVERLGRENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSSVMIIVPNLGPKDVYLAYLPMAHILELVAENLIAAVGGCIGYGSPLTLTDTSNKIKKGKQGDATALMPTVMAAVPAILDRVREGVLKKVNAKGGLSKKLFYLAYARRLQAINGSWFGAWGLERALWNLLVFKKVQAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGSFSDFDDTSVGRVGPPVPCSYIKLIDWPEGGYSTNDQPMPRGEIVIGGPNVTLGYFKNEEKTRESYKVDEKGMRWFYTGDIGRFHKDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALFASPFVDNIMLHADPFHSYCVALVIVSHPTLEQWASKQGIAYSDLSELCSKEETVKEAHASLVKEAKKARLEKFEIPAKIKLLSEPWTPESGLVTAALKLKREIIRKTFQAELSELYAS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01241 694 Pfam AMP-binding enzyme 100 561 IPR000873 -
Pumo10g01241 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 41 692 - -
Pumo10g01241 694 Gene3D - 51 553 IPR042099 -
Pumo10g01241 694 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
Pumo10g01241 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01241 Pumo-Chr10 16325348 16331241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01241 147 693 Acyl Lipid Metabolism Gene Families AT1G77590 77.697 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01241 K01897 - gmx:100778889 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01241 10 16325348 16331241 Pumo10g01241 10 16325348 16331241 ECH