Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01240 ATGGAGGAGAGCTTCGTTTTCCAGTGGAGCGTCATCAGATCTCTCTTGTCCATCCTTCAGTGGTGGGCCTTCAATGTCACCGTTATCATCGTCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTATCAGTTTCCTGTGTCCACTTTATCTGTTCAACCATTGGAGGATATGTGGTAATTAAGGTGCTGAAGCTTAAACCACTGATAACTGTTGACCCTGAAGATCGCTGGAGAAGAATCTTTCCAATGTCATTTGTGTTCTGTATTAACATAGTTCTGGGGAATGTGAGCCTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACTCCTGCCACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTGTAACAGAGCTTAGTTTTAATATGTTTGGATTTTGTGCTGCCTTATTTGGCTGTTTGGCTACATCCACAAAGACTATTCTTGCAGAATCTCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATCTTGGCGCTTCCTGCCATGTTACTTGAAGGCAATGGAATCCTTGAATGGTTAAATACTCATCCATATCCTTGGTCGGCTCTCATCATTATTTTTAGCTCCGGGGTGTTGGCTTTCTGTCTTAACTTCTCCATTTTTTATGTGATTCACTCTACCACTGCTGTAACATTTAATGTTGCCGGAAATCTTAAGGTTGCAGTTGCCGTCCTTGTTTCTTGGCTGATATTTAGGAATCCAATTTCATATTTAAATTCTGTTGGATGTGCCGTGACTCTTGTGGGATGTACATTCTATGGTTATGTGAGGCACAAGCTCTCCCAACAGCCACCAGTTCCAGTAACTCCTCGGACACCCAGGACTCCTAGGACCCCTCGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAG 1038 0.42 MEESFVFQWSVIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSTIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPAMLLEGNGILEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNSVGCAVTLVGCTFYGYVRHKLSQQPPVPVTPRTPRTPRTPRSKMELLPLVNDKLEDKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01240 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Pumo10g01240 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Pumo10g01240 345 FunFam UDP-galactose transporter 1-like 47 158 - -
Pumo10g01240 345 MobiDBLite consensus disorder prediction 310 329 - -
Pumo10g01240 345 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Pumo10g01240 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 301 - -
Pumo10g01240 345 Gene3D - 66 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01240 Pumo-Chr10 16303252 16308150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01240 1 345 Organic Solute Cotransporters AT1G77610 88.439 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01240 K26222 - gmx:100778350 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01240 10 16303252 16308150 Pumo10g01240 10 16303252 16308150 ECH