Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01236 ATGCCTTCTGCTCCTTCCAAACTCTACGCAGATGATGTGAGCCTCCTCGTTGTGACGCTAGACACCAACCCTTTCTTCTGGAGCACTTTCCCCTTCCCCTTCGCCGAGTTCCTCTCCCAAGTACTCGCTTTTCTCAACTCGATCTTGCTCCTCGGCCAGCTCAACCAGGTCATAGTCATCGCCACCGGATGCAACTCTTGCGGCTACGTTTACGATTCCACTTCCGATAAGAACCATGGCTCCACCGCCGGTACAATGCCCGCGCTCTATTCCAATTTACTTCACAATCTGGACGAGTTTGTCGCTAAGGACCAGCGATTAGACACCGACGCGGCTCACACGCCGGGAACCGTTCCTTCTTCGCTGTTATCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCGATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGACTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCGTTCTACGGTTCCTATAGACTCTTGTTATATTGGTTCAAATAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTACATTCTCGTGCATTTTTACGACTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGCTTCTGCCATAAGCAAACAATTGACATGGGCTTCGTATGTTCTGTATGCTTATCCATATTCTGCGAGCATCATAATAAGTGTTCAACCTGTGGGTCTGTATTTGGCCAGGCTCAACTAGATGCCTCAGCAGCCAACCGGAAAAGAAAGGATTGA 885 0.4814 MPSAPSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNSILLLGQLNQVIVIATGCNSCGYVYDSTSDKNHGSTAGTMPALYSNLLHNLDEFVAKDQRLDTDAAHTPGTVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGTADGPEQYVAIMNAIFSAQRSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGFVCSVCLSIFCEHHNKCSTCGSVFGQAQLDASAANRKRKD 294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01236 294 Pfam Transcription factor Tfb4 13 275 IPR004600 GO:0000439|GO:0006289|GO:0006355
Pumo10g01236 294 Gene3D von Willebrand factor, type A domain 10 223 IPR036465 -
Pumo10g01236 294 FunFam RNA polymerase II transcription factor B subunit 4 10 223 - -
Pumo10g01236 294 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 10 288 IPR004600 GO:0000439|GO:0006289|GO:0006355
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01236 K03143 - gmx:100810574 570.466
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01236 10 16260685 16265681 Pumo10g01236 10 16260685 16265681 ECH