Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01235 ATGGCAGAAGACAGTGAGGGGAAGAAGAAAGAGGAGAATATAGAGTCTCAGATTGAAACCGCTATGCGCTCTCGCGTCTCTCACTTCAAGGAACAATCTGACTCCTTGACGTTCGAGGGTGTTCGTCGATTGCTCGAGAAAGACCTGGGATTGGACGAGTATGCTTTGGATGTGCACAAGAGATTTATCAAGCAATGTTTGCTCAAGTGCTTAGAAGGGGTTGGTGATGATGATGGCCCAAAGATATCAGGGAAGGAAGGAGAAAAAGGTGCAAGTACACAAGAGTCAGAAGATCCAAAAGAAGAATGTGAATCAAAAGATGTAAAGGATCCTTGCCCTGAAGATGAGGAGAAAATGGAAGACTCTCCAGTGTTAGGTCTTCTTAAAGAACAAAAAAGGGCTAAACTTGAAACCAAGGATGATAAAGGCAATGGAAACAAAGTAGTTCCAAGTGAGGCCCTAATTAAGAAAGCTGTTAGAAAAAGATCTCCGTACATCAAGGCTAATGCAGAGAAAATCACTATGGCTGGTCTTCGTCGGCTATTGGAGGAAGATCTTAAACTTGATAAATTTACTCTTGATCCCTATAAGAAGTTTATAAGTCAACAGCTTGATGAGGTACTAGCGTCTTCTGAAGTTTCGGAACCTGCAAAGAGTGCTAAGAAAATTGTTAAGAAAAAACCTGATACCAAAGTAACTAAAAAGGTCAGCAGTGAAGAGAACTCTGATACTTCAGATAAGGAGACTGATGAGGAAGAGAGTCAGGAAGATGAAGTTAAACCTAGGAAAAAGATTGTTCCGAAAGGAAAGAAGCAGACTTCTCTTCTACCCAAAAAGCGTAAAGGAGAGGAGACTGATCTATCCAGTAAAAAAAAGGTCAAGCCTGCTAAAGCAGCCTCAGAAGACAATAGTGATGCAGAAGATGATGGGAAAAACTCTGAAGATGATCAGTCCCATTCATCACCAGAGAAACCTTCCAAGAAGAAAGAAGTTTCAACTCCTGTCTATGGTAAACGCGTGGAGCACTTAAAATCTGTTATTAAAGCATGTGGAATGAGTGTCCCTCCCGCAATTTACAAAAAAGTCAAGCAAGTGCCTGAAAACAAACGGGAAGGGCAGCTAATTAAGGAGTTGGAGGAAATACTGTCTAGAGAAGGATTGTCTTCAAATCCATCTGAAAAGGAAATCAAGGAAGTAAAAAGGAAGAAGGCGAGAGCCAAAGAACTTGAGGGTATTGATGTAAGCAATATTGTGTCAAGTTCACGTAGAAGGTCAACAAGTGGTTATACAGCTCCTCCACCTCCAAAGCCCAAGGTTCCAGTTAAAACTAGTGGCAATGGGGCTGAAGGTAGTGATAATGACAATGAAGACAATGACAATGAAGACAATGATAATGAAGAGGATGAAGAAGATGAGGAAGAGGATAACAGTGATGAGGATGGAAGTCAGAGTGAAGAATTTAATGATGATGAAGAGGACAGTGATTGA 1488 0.4106 MAEDSEGKKKEENIESQIETAMRSRVSHFKEQSDSLTFEGVRRLLEKDLGLDEYALDVHKRFIKQCLLKCLEGVGDDDGPKISGKEGEKGASTQESEDPKEECESKDVKDPCPEDEEKMEDSPVLGLLKEQKRAKLETKDDKGNGNKVVPSEALIKKAVRKRSPYIKANAEKITMAGLRRLLEEDLKLDKFTLDPYKKFISQQLDEVLASSEVSEPAKSAKKIVKKKPDTKVTKKVSSEENSDTSDKETDEEESQEDEVKPRKKIVPKGKKQTSLLPKKRKGEETDLSSKKKVKPAKAASEDNSDAEDDGKNSEDDQSHSSPEKPSKKKEVSTPVYGKRVEHLKSVIKACGMSVPPAIYKKVKQVPENKREGQLIKELEEILSREGLSSNPSEKEIKEVKRKKARAKELEGIDVSNIVSSSRRRSTSGYTAPPPPKPKVPVKTSGNGAEGSDNDNEDNDNEDNDNEEDEEDEEEDNSDEDGSQSEEFNDDEEDSD 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01235 495 SMART CHZ_2 403 438 IPR019098 -
Pumo10g01235 495 MobiDBLite consensus disorder prediction 276 338 - -
Pumo10g01235 495 MobiDBLite consensus disorder prediction 380 495 - -
Pumo10g01235 495 MobiDBLite consensus disorder prediction 390 410 - -
Pumo10g01235 495 Pfam Histone chaperone domain CHZ 405 429 IPR019098 -
Pumo10g01235 495 PANTHER HIRA-INTERACTING PROTEIN 3 1 494 IPR037647 -
Pumo10g01235 495 MobiDBLite consensus disorder prediction 74 146 - -
Pumo10g01235 495 MobiDBLite consensus disorder prediction 452 495 - -
Pumo10g01235 495 Coils Coil 456 476 - -
Pumo10g01235 495 MobiDBLite consensus disorder prediction 208 338 - -
Pumo10g01235 495 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 149 209 IPR014876 -
Pumo10g01235 495 MobiDBLite consensus disorder prediction 414 428 - -
Pumo10g01235 495 MobiDBLite consensus disorder prediction 73 149 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01235 2 83 EF-hand Containing Proteins AT1G44780 39.024 2.50e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01235 - - gmx:100784738 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01235 10 16250384 16257367 Pumo10g01235 10 16250384 16257367 ECH