Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01226 ATGGAGACTGAGCCACTGTCCACTGATATCAGAATCAGTGCTTTCGGGTTTGGAAGGGATCACCGCACCGCAACGCACTTGTTTTGCTCTGCGATTGCAATCGTTTCCATTCATTTCGCCGCTCATGGGTTTCTCAAAGGAACAGCTTCTTGCGCGGATCTTCAGATTCCATTTTCCCAGTATGAGCATCCAGTTGTTTTGACTGTTGACGCTCAGGCTCAATATGTCGGACATTTGGGGGGTGGGCTTAGTAAGAATTTATTTCTCAAGGACAAGAAAAGCAGGTTGTATATTGTTTCTGCTTTAGCTGCTACCAAAGTAGATCTCAAAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTCTCAGAATGGCACCTGAGGAGGCTTTAGGTGAAGTACTTCAGGTACCCTTGGGTTGTGTCACTCCATTTGCACTAGTGAATGAATCAGCACGAGATGTTTCACTGATATTAGATCAAGGGTTCAAGACTCAGAAGCACTGCTTCTTCCATCCACTGTCGAATGACATGTCTATATCTCTAAATGCATGTGATCTTGACAAGTTTCTTAAATCAATTGGAAGAAATCCCTCATACGTTGATTTGGAGGCCAACCCTACAGTGGGGAAAGATCAACCTCCTGATCTAGCTGCACTAGTTCCATCTGGTTCAATAGTTTTACCCGATCAACCACAAAAGCAATCTTCATCACAGGTTCCTAAGGATGCAAACTATGTTTCTGTGGATAATAGAACCAATACAGTTTCAGCCAAAGTTGTCAAGCCATCCTCTGGTGGGAAAAGTACAAAGGGGACCCCGGTAAAAAATGTTAATTCATCGGGCTCCTTTGCAGATGTTGGGCAATTCGTTGAAGAGATATTGCAAAAAACATCACAATTATTGCTTTCAGAGGTCAAGGAAGAAAATATAAAGTTACACGGGGAGCAGCTGGGTCCTGTGTTATCTGACAAATTACAGAAAAACCTCAACGCAGAGTTTAAGAACCTTGCTATGATATTTAAGAACACAGCATATACAGAAGGATTCCATGCTGGTACTCACTATAGGCCCCCGCTGATGTGA 1086 0.4337 METEPLSTDIRISAFGFGRDHRTATHLFCSAIAIVSIHFAAHGFLKGTASCADLQIPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIVSALAATKVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLILDQGFKTQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLEANPTVGKDQPPDLAALVPSGSIVLPDQPQKQSSSQVPKDANYVSVDNRTNTVSAKVVKPSSGGKSTKGTPVKNVNSSGSFADVGQFVEEILQKTSQLLLSEVKEENIKLHGEQLGPVLSDKLQKNLNAEFKNLAMIFKNTAYTEGFHAGTHYRPPLM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01226 361 Pfam Aminoacyl-tRNA editing domain 63 190 IPR007214 GO:0002161
Pumo10g01226 361 CDD PrdX_deacylase 52 201 - -
Pumo10g01226 361 Gene3D - 48 210 IPR036754 GO:0002161
Pumo10g01226 361 SUPERFAMILY YbaK/ProRS associated domain 53 203 IPR036754 GO:0002161
Pumo10g01226 361 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 52 356 IPR040285 -
Pumo10g01226 361 FunFam Putative prolyl-tRNA synthetase 46 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01226 Pumo-Chr10 16042119 16046504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01226 - K08176 gmx:100817904 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01226 10 16042119 16046504 Pumo10g01226 10 16042119 16046504 ECH