Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01223 ATGAGATTCACGCCTTCTCCCAAGTTCTTAGGCTTTTCAAATCACTTCCACTCCGTTATCGCACTCGGACCCTCTTTCTCTCCAACCCCAAAGTTCTCATCTTCCATTGCCGCCACCATGTCCACTCTATCCACTCAGAACGACACCATCCCCCAGAAGACGCAACAACCTTTGCAGATTGCAAAGCGCTTAGAGAAATTTCAGACAACAATTTTCACTCAAATGAGCTTGCTTGCCATCAAACATGGAGCCATAAACCTTGGTCAAGGCTTTCCCAACTTTGATGGTCCGGATTTTGTAAAGGAAGCAGCGATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCCCGGGGTTATGGAGTTCCAGACCTGAACATTGCCATTGCTGAGAGATTTAAGAAAGATACTGGACTTGTGGTAGACCCTGAAAAGGAAGTTACTGTTACATCTGGATGCACAGAAGCAATTGCTGCAACTATGATAGGACTAATAAATCCTGGTGATGAGGTTATTATGTTTGCTCCTTTTTATGATTCTTATGAGGCCACTTTGTCCATGGCTGGTGCAAAAGTAAAAAGCATCACTTTGCGCCCTCCAGATTTTGCTGTCCCTATTGAAGAGTTGAAGTCCACCATCTCAAAGAATACCCGTGCCATTCTTATAAATACTCCTCACAACCCTACTGGAAAGATGTTCACTCGCGAGGAGCTCAATGCCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACTGATGAAGTTTATGATAAGTTGTCTTTTGATATGGAGCACATTTCAATGGCTTCTTTGCCTGGAATGTTTGAAAGGACAGTGACAATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGTTGGGCCATAGCACCCCCACACTTATCATGGGGAGTGCGACAGGCACACGCTTTCCTCACTTTCGCAACTGCCCATCCTTTTCAGTGTGCTGCTGCAGCAGCTCTGAGAGCACCAGACTCTTACTATGTAGAGCTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTTGAAGGATTGAAGGCTGTAGGCTTCAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAAATGATGTTGCATTTTCTGAATATCTAGTTAAGGAAGTGGGAGTGGTGGCAATCCCTACCAGTGTATTTTACTTGAATCCAGAAGAGGGAAAGAATCTAGTCAGATTCACTTTCTGCAAGGATGAGGAAACTATTAGGTCTGCTGTTGAGAGGATGAAAGAGAAGCTTAGAAAATGA 1326 0.4412 MRFTPSPKFLGFSNHFHSVIALGPSFSPTPKFSSSIAATMSTLSTQNDTIPQKTQQPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGYGVPDLNIAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATMIGLINPGDEVIMFAPFYDSYEATLSMAGAKVKSITLRPPDFAVPIEELKSTISKNTRAILINTPHNPTGKMFTREELNAIASLCIENDVLVFTDEVYDKLSFDMEHISMASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLSWGVRQAHAFLTFATAHPFQCAAAAALRAPDSYYVELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDVAFSEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEETIRSAVERMKEKLRK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01223 441 PANTHER FI04487P 60 440 - -
Pumo10g01223 441 Pfam Aminotransferase class I and II 85 434 IPR004839 GO:0009058|GO:0030170
Pumo10g01223 441 FunFam Aminotransferase, class I/classII 97 335 - -
Pumo10g01223 441 Gene3D Aspartate Aminotransferase, domain 1 74 435 IPR015422 GO:0003824
Pumo10g01223 441 Gene3D - 97 335 IPR015421 GO:0003824
Pumo10g01223 441 CDD AAT_like 85 437 - -
Pumo10g01223 441 SUPERFAMILY PLP-dependent transferases 59 440 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01223 Pumo-Chr10 16010867 16015083 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01223 K23977 - gmx:100818968 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01223 10 16010867 16015083 Pumo10g01223 10 16010867 16015083 ECH