Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01216 ATGGCTTCTGAGAAGGTTGAGACTGTTGTTGCAGGGAACTACCTAGAAATGGAGAGGGAAGAGGAAGGTTCTAAGTCTACTACTAGCAAATTGTCTAGGCTCTTTTGGCATGGTGGCTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTACTGACACTACCATATTCCTTTTCACAACTGGGGATGCTATCTGGGATCATATTTCAGCTTTTTTATGGACTGATGGGAAGCTGGACTGCTTACCTTATCAGTGTCCTTTATGTTGAGTACAGAACCAGAAAGGAGAGAGAAAAAGTTGATTTCAGAAACCATGTTATTCAGTGGTTTGAAGTGCTTGATGGACTTTTGGGCAAACACTGGAGGAATCTTGGTCTTTTTTTCAACTGTACTTTCCTTCTGTTTGGATCAGTAATTCAACTAATTGCTTGTGCAAGTAACATATACTACATAAATGACAATCTGGACAAGAGAACTTGGACTTACATCTTTGGCGCATGCTGTGCAACAACAGTCTTCATCCCTTCTTTCCACAATTACAGAATCTGGTCATTCTTGGGCCTCATGATGACCACTTACACTGCATGGTATATGACCATAGCTTCCCTTACCAATGGCCAGGTTGAGGGGGTGACGCACTCAGGGCCAACCAAATTGGTTCTCTACTTCACTGGGGCTACCAACATTCTCTATACTTTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGCTGATATATCTGATCGCAACCCTATATGTGCTGACCCTAACTTTGCCATCAGCAGCTGCTGTCTATTGGGCATTTGGGGACATGCTTCTTACCCATTCCAATGCCCTCTCATTGCTCCCAAGGAATGGCTTCAGAGATACCGCTGTCATCCTCATGCTCATTCATCAGTTCATAACTTTTGGATTTGCTTGCACTCCTTTGTACTTCGTGTGGGAGAAATTCATTGGGGTGCATGAAACCAAGAGTTTGTTCAAAAGGGCGTTGGCTAGACTTCCTGTTGTGATTCCAATATGGTTCCTGGCAATCATATTCCCTTTCTTTGGTCCCATTAACTCAACTGTTGGATCTCTCCTTGTCAGCTTCACTGTTTACATAATTCCTGCTTTGGCACACATGGTCACCTTTGCTTCAGCACCCGCTAGAGAGAATGCTGTGGAGAGACCACCATCAAAGATAGGAGGTTGGGTAGGATTGTACTCCATGAACGTGTTTGTGGTGGTATGGGTTTTGGTGGTAGGATTTGGGTTGGGAGGATGGGCAAGCATGATTAATTTCATACGCCAAATTGACACATTTGGGCTATTTGCAAAGTGCTATCAGTGTCCCCCTCACAAGGCTTAA 1398 0.4392 MASEKVETVVAGNYLEMEREEEGSKSTTSKLSRLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTTYTAWYMTIASLTNGQVEGVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKLIYLIATLYVLTLTLPSAAAVYWAFGDMLLTHSNALSLLPRNGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSKIGGWVGLYSMNVFVVVWVLVVGFGLGGWASMINFIRQIDTFGLFAKCYQCPPHKA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01216 465 PANTHER OS05G0424000 PROTEIN-RELATED 43 426 - -
Pumo10g01216 465 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01216 Pumo-Chr10 15888268 15891267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01216 1 464 Organic Solute Cotransporters AT1G77690 88.060 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01216 K13946 - gmx:100815243 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01216 10 15888268 15891267 Pumo10g01216 10 15888268 15891267 ECH