LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo10g01208	ATGCATCCTTTCTGCTGCGTGTCCGCCATTTCCGACCAGGCCTCGCCAGTGAAACCCTCGTTCGCGGACTTCGCCATGCCGCCTCTCCCCGGCGCCGCCGCCGCCGTGAGATCCGATTCGGTGCCGCGGCACAGCCACAAGCACAGCCACAGCGGGAGCCAGCGGGAGCAGCCGGTGGACGTGAAGATCAACGACCTCGTCGGGAACGGAATCTCCGGAGTACTCTACAAGTGGGTGAATTACGGCAAAGGATGGAGACCGCGGTGGTTCGTACTCCAAGACGGCGTTCTCTCCTACTACAAGATTCACGGACCTGATAAGATCGTCGTGAATCCCGAAACTGAGAAAGGCTCCATGGTTTCGACGATTCGCGAGAGCAAATCTGACGACAAGCGGTTTTCGGTATTCACGGGAACGAAGAGGCTCCACCTGAGGGCGGAGACGCGTGAGGATCGCGTGGCGTGGATGGAGGCGTTGCAGGCGGTGAAGGACATGTTCCCGCGGATGTCGAACAGCGAGTTGATGGCTCCGGTGGACAATGTAACCGTTTCGACGGAGAAGCTGAGAGTTCGGCTTATGGAAGAGGGAGTGAGCGAGGCGGCTATTCAGGAGAGTGAGCAAATCATGAGGACTGAGTTTGCGGCGCTGCAAAGCCAGCTTGTGCTGCTTAAGCAGAAGCACTCCGCCCTCATTGACACCTTGCGTCAATTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTGGTTGATGAGAGCCAAAGACAATGGATTGATGAAGAGGCTTCCTCAAGATTAGCGCAAGAAAAATTTAGTGAAGGAACTGCAAGTGAATCTGAAGATGACAATGATAGAAATGATGCTGCAGAGGAAGAAACAGATGATGACGACAATGCCTTTTTTGATACTCGTGATATTCTATCATCCAGTTCTTTTAAAAGTAACGGGTCTGATTATCGAGTATCATCCTTCTCTTCAGATGATGAAGGTTTCTATGCATTTGAATCAGAGGATGACATAGATCCTTCGATTAGATATGTTGGAACCAGTTATCCTCATGTTAAGCGGCGTAAGAAATTGCCAGACCCTGTAGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCACTTTCCTCCCTGCAAAAATGTTTTGAAGAAATGGAGTATTCATATCTTCTGGACCAAGCATATGAATGGGGAAAAAAGGGTAATAGCCTCATGAGGATTCTCTATGTTGCGGCTTTTGCTATATCTGGCTATGCTGCAACTGAAGGAAGAGTTTGCAAACCATTTAATCCATTACTTGGGGAAACATATGAGGCTCACTATCCGGATAAAGGCCTTCGTTTTTTCTCAGAGAAGGTCAGTCATCACCCTATGATTGTCGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACCTAAAGAGCAAATTTTGGGGGCGATCAATTCAGCTTGACCCTGTCGGTGTTTTGACTTTGGAATTTGATGATGGGGAGGTTTTCCAGTGGAGCAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTATACTGTGATCACTATGGTACAATGCGTATACAGGGAAACCAAGAGTACTCGTGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGCATCATTCAAGATAGGAATGGAAAAACTGTATCAACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTTAATGGAGACTACACTGGGAAAGGCAAAGGTCATGAATCTTTGTCAGATGCCCGTTTGCTCTGGAAGCGAAGCAAGGCTCCCAAGTTTCCCACTAGATATAACTTCACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTGAAGGAGAAGTTGCCACCTACAGATTCAAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGAGAGTATGACATGGCAAATGCAGAAAAGTTACGGCTAGAGCAGCGGCAGCGCCAGGCTCGGAAGATGCAAGAGAGTGGTTGGAAACCACGGTGGTTTGCAAAGGATAAAGCGAGCGGGACATACCGCTACATAGGAGGGTACTGGGAGGCCAGACAACGAGGAAACTGGGACTCCTGCCCTGACATCTTTGGCCAAATTCCTTCGGATCATATTTCTGACGAAGGTCAAATTACATTTTAG	2259	0.4701	MHPFCCVSAISDQASPVKPSFADFAMPPLPGAAAAVRSDSVPRHSHKHSHSGSQREQPVDVKINDLVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSMVSTIRESKSDDKRFSVFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVTVSTEKLRVRLMEEGVSEAAIQESEQIMRTEFAALQSQLVLLKQKHSALIDTLRQLETEKVDLENTVVDESQRQWIDEEASSRLAQEKFSEGTASESEDDNDRNDAAEEETDDDDNAFFDTRDILSSSSFKSNGSDYRVSSFSSDDEGFYAFESEDDIDPSIRYVGTSYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGKKGNSLMRILYVAAFAISGYAATEGRVCKPFNPLLGETYEAHYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVHGIIQDRNGKTVSTLFGKWDESMHYVNGDYTGKGKGHESLSDARLLWKRSKAPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYDMANAEKLRLEQRQRQARKMQESGWKPRWFAKDKASGTYRYIGGYWEARQRGNWDSCPDIFGQIPSDHISDEGQITF	752

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo10g01208	752	Gene3D	-	69	166	IPR011993	-
	Pumo10g01208	752	MobiDBLite	consensus disorder prediction	282	298	-	-
	Pumo10g01208	752	Gene3D	-	456	634	-	-
	Pumo10g01208	752	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	70	724	IPR000648	GO:0008289
	Pumo10g01208	752	FunFam	Oxysterol-binding protein-related protein 2A	667	738	-	-
	Pumo10g01208	752	SUPERFAMILY	PH domain-like	71	170	-	-
	Pumo10g01208	752	FunFam	oxysterol-binding protein-related protein 1D isoform X1	456	628	-	-
	Pumo10g01208	752	Gene3D	-	667	728	-	-
	Pumo10g01208	752	MobiDBLite	consensus disorder prediction	40	55	-	-
	Pumo10g01208	752	Pfam	Oxysterol-binding protein	370	724	IPR000648	GO:0008289
	Pumo10g01208	752	MobiDBLite	consensus disorder prediction	35	59	-	-
	Pumo10g01208	752	ProSiteProfiles	PH domain profile.	68	164	IPR001849	-
	Pumo10g01208	752	SMART	PH_update	69	166	IPR001849	-
	Pumo10g01208	752	Pfam	Pleckstrin homology domain	76	160	-	-
	Pumo10g01208	752	CDD	PH_ORP_plant	71	171	-	-
	Pumo10g01208	752	Coils	Coil	675	695	-	-
	Pumo10g01208	752	MobiDBLite	consensus disorder prediction	260	299	-	-
	Pumo10g01208	752	SUPERFAMILY	Oxysterol-binding protein-like	365	745	IPR037239	-
	Pumo10g01208	752	Coils	Coil	220	254	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo10g01208	Pumo-Chr10	15818450	15825030	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo10g01208	K20456		-	gmx:100137077	1442.17

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo10g01208	10	15818450	15825030	Pumo10g01208	10	15818450	15825030	ECH