Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01193 ATGAAGACTCGCACCTCTGCCAAAATCTCTGCAACATGGATTCCAATTTTCTCTGTCTTTTCCTTCATTATTGGCATGCTCATCACAAGCAGGATGTGGGACCCACCTGAATCAAACGGGTTGCTTATTGCGCAGCATCAACGGGACCAGCAACTACAAGTGATCTCAGGGGATTGTGCTACCAAGAAGATGCAGCCCAAGGATGCAGTGAGCGAATTGCAGAAAACCCATGAAGCCATTCAAGCTTTAGATAAACAGGTTTCGATGCTTCAGATGGAACTAGCAGCAGCTAGGAGTTCTCGTGAAAGTGGGATCTCGGATTCAAATGCTTCAACCACCACTTCTGGGGAAGGTTCTCCAAGGAAGAAGGCATTTATAGTGATAGGCATAAACACAGCTTTCAGCAGCAGGAAGAGGCGTGATTCAGTTAGAGAGACTTGGATGCCTCAAGGTGAACAACTTCTTCAATTGGAACGGGAGAAGGGAATTGTTATCAGATTCATGATTGGTCACAGTGCAACTTCCAACAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCTCAGCACAAAGACTTCCTTCGCCTAGAACATGTTGAAGGGTATCATGAGCTGTCTGCAAAGACAAAGATTTTCTTTTCCACTGCAGTTTCAAAATGGGATGCTGATTTCTATGTCAAGGTGGATGATGATGTCCATGTCAATTTAGGTGTCCTGGCAACAACCCTTGCTCGTCATCGATCAAAACCCAGGGTCTACATTGGGTGTATGAAATCTGGGCCTGTTCTTTCTAGAAAGGATGTCAAATACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGGAACAAATACTTCCGGCATGCAACTGGGCAGATATATGCAATCTCTAAGGATCTGGCCACTTACATTTCCATCAACCAGCCCATTTTGCATAAATATGCTAATGAAGATGTCTCGCTTGGTGCATGGTTCATTGGTCTTGAAGTTGAGCATATTGATGACCGCAATATGTGCTGTGGAACTCCTCCAGACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTACACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1182 0.4467 MKTRTSAKISATWIPIFSVFSFIIGMLITSRMWDPPESNGLLIAQHQRDQQLQVISGDCATKKMQPKDAVSELQKTHEAIQALDKQVSMLQMELAAARSSRESGISDSNASTTTSGEGSPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVSKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRNMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01193 393 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 84 334 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pumo10g01193 393 FunFam Hexosyltransferase 118 339 - -
Pumo10g01193 393 MobiDBLite consensus disorder prediction 98 120 - -
Pumo10g01193 393 Gene3D - 116 339 - -
Pumo10g01193 393 MobiDBLite consensus disorder prediction 101 119 - -
Pumo10g01193 393 Pfam Galactosyltransferase 138 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pumo10g01193 393 Coils Coil 73 100 - -
Pumo10g01193 393 Pfam Domain of unknown function (DUF4094) 10 100 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01193 Pumo-Chr10 15570800 15575553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01193 1 393 Glycosyltransferase AT1G77810 72.040 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01193 K20855 - gmx:100776715 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01193 10 15570800 15575553 Pumo10g01193 10 15570800 15575553 ECH
Pumo9g01288 9 38080641 38085024 Pumo10g01193 10 15570800 15575553 PCT