Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01186 ATGGCGGAAAGTTCCGAATGCATTGACGTGAAGCTCTCTCCTGCACCGGACCAAAGGATTCCGTTGATGAGATCAAGAAGAGGACGGCGGCGTGGCGACACGTGGGTGGTGTCGGTGTTCGTAATAATCCAAATTGGGGTTTTCATAGCCACCATGCTCGTCAACGATTGCTGGACCAATTCTCACGGCGATTGCCTTCTCCAACCTCTCGGAAGGTTCTCGTTCCAGCCTCTCACCGAGAATCCTCTCTTAGGTCCTTCTCAGTCCAAGTTAGATGAAATGGGAGCTCTTCGACGGAGCCTTTTGACAGAGCATCATCAAACATGGCGTCTTTTCACATTTCCATTTTTGCATGGTGGACTCTTCCACCTGCTCCTCAATCTCTGCAGTGTCATCTATGTGGGAGTTAGCCTAGAGCACCACTTTGGACCCATAAGGATTGGTACAATCTATGCATTGTCTGCTTTTGTGGGTTCCTTGGTGGCTTCTCTTTTTCTCCAAAACACCCCATCTGTTGGTGCTTCCGGTGCTTTATATGGATTACTGGGGACATTGCTTTCGGAACTTGTTTGGAACTGGAAATTTCATTCCAATAAGATTTCAGCAATAGCATCATTAGTCTTTGTCTTTGTGTGCAACTTCGTCCTTGGTTTTCTGCCTTATGTAGACAATTTTGCAAGCATTGGAGGTTTTATATCAGGATTCCTTCTTGGATCTGTATTTTTACTCAGCCCTCAGCTCCAACCAATAGCTCCAAATAAAGGAGGTCTGATTGATTATGGTGTCAAAAGTTACATCAAGTTAAAGTTGAAGCAAAAGCTGGACAGACCAGTTCTCAGGATTGTTTCTCTTATCCTCTTCAGCCTTTTATTGGCTGGTTGTCTTGTGGCAGTTCTTCATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTCGATTGTATCCCTTTTACAAGCTGGCACTGCAAAGACACAGAAACCTCTTGTGAGACAATGGTGAGCAATGCTCAGCTGACAATGACCTGTATTGGGAATGGCAATTTCCGAGTATTTCCTTTTACCAACATCTCTCGGGCAAGGATTAATGATTTGTGCAATCTGATATGCTGA 1116 0.4471 MAESSECIDVKLSPAPDQRIPLMRSRRGRRRGDTWVVSVFVIIQIGVFIATMLVNDCWTNSHGDCLLQPLGRFSFQPLTENPLLGPSQSKLDEMGALRRSLLTEHHQTWRLFTFPFLHGGLFHLLLNLCSVIYVGVSLEHHFGPIRIGTIYALSAFVGSLVASLFLQNTPSVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDNFASIGGFISGFLLGSVFLLSPQLQPIAPNKGGLIDYGVKSYIKLKLKQKLDRPVLRIVSLILFSLLLAGCLVAVLHGININSYCTWCPYVDCIPFTSWHCKDTETSCETMVSNAQLTMTCIGNGNFRVFPFTNISRARINDLCNLIC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01186 371 PANTHER RHOMBOID-RELATED 22 324 IPR002610 GO:0004252|GO:0006508|GO:0016020
Pumo10g01186 371 SUPERFAMILY Rhomboid-like 32 246 IPR035952 -
Pumo10g01186 371 Pfam Rhomboid family 104 244 IPR022764 GO:0004252|GO:0016020
Pumo10g01186 371 Gene3D - 30 244 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01186 Pumo-Chr10 15513724 15516826 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01186 - - gmx:100775875 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01186 10 15513724 15516826 Pumo10g01186 10 15513724 15516826 ECH