Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01184 ATGAGCAATCTCAGAACCCTATGTAGACCTCAGACGGTGTTCTCTTTCATTAGTTGCAGACACCAATTTCGATCTAGGGTTTCGTTTCGAAACCCTAATTGCAAGCCCCGTTTGCCATCGCCGTTTCTGTATTCTACAATCGGTTCCTGGGGTTCGAATCCCTCGTTTCGCGTGAACCAGAGGAGAACTGTGGCCAAGGCAACAAACTGGGCTGAACAAAAGTCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGATGAGCAGATAAAGAATGCTTACAGACGTTTTGCCAAATTTTATCATCCAGATGTCTATGATGGCAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCTAGATTCATCAAGATTCAAGCTGCTTACGAATTGCTTATAGATGGGGAGAGGCGAAAACAGTATGATATGGATAACCGGGTCAACCCTATGAAGGCATCTCAGGCATGGATGGAGTGGCTTATAAAAAAGCGGAAAGCTTTCGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAACAGCGCGAGTTAAATCTTCGTGTGCGTCAACTTTCTCGTTCAAAGATTGATCTAGATGAAGCAAGGAAGATTCTGGCAAGAGAAAAGAAGGCTTCGGCTGAATATTACTCAAATACCCTCAAAAGGCACACACTAATACTGAAGAAAAGAGATTTGATGCGAAGAAAGGCCGAGGAAGAAAAGAAGAAGACTATCAGCCGGCTCTTGGCAGCAGAAGGTCTTGAGCTTGATGATTCAGATAGTGATGAGGCACTGTAG 807 0.4511 MSNLRTLCRPQTVFSFISCRHQFRSRVSFRNPNCKPRLPSPFLYSTIGSWGSNPSFRVNQRRTVAKATNWAEQKSPYETLELEGDADDEQIKNAYRRFAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDGERRKQYDMDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQRELNLRVRQLSRSKIDLDEARKILAREKKASAEYYSNTLKRHTLILKKRDLMRRKAEEEKKKTISRLLAAEGLELDDSDSDEAL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01184 268 SUPERFAMILY Chaperone J-domain 25 142 IPR036869 -
Pumo10g01184 268 SMART dnaj_3 74 138 IPR001623 -
Pumo10g01184 268 CDD DnaJ 76 135 IPR001623 -
Pumo10g01184 268 ProSiteProfiles dnaJ domain profile. 75 146 IPR001623 -
Pumo10g01184 268 FunFam Chaperone protein dnaJ 61 166 - -
Pumo10g01184 268 Pfam DnaJ domain 76 143 IPR001623 -
Pumo10g01184 268 Gene3D DnaJ domain 60 160 IPR036869 -
Pumo10g01184 268 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Pumo10g01184 268 PANTHER CO-CHAPERONE PROTEIN DJLA 56 260 - -
Pumo10g01184 268 PRINTS DnaJ domain signature 164 183 IPR001623 -
Pumo10g01184 268 PRINTS DnaJ domain signature 118 138 IPR001623 -
Pumo10g01184 268 PRINTS DnaJ domain signature 95 110 IPR001623 -
Pumo10g01184 268 PRINTS DnaJ domain signature 77 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01184 Pumo-Chr10 15504699 15507649 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01184 - - gmx:100808285 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01184 10 15504699 15507649 Pumo10g01184 10 15504699 15507649 ECH