Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01163 ATGCTGTTAGGGAAGAGACCTCGTCCTCCAATGAAGAGAACAACAAGCATGTCGGAGATAACCTTCGATCTGAACACAACCTTGGGCGATGATCCAAACAACCCCGTGAAAGGACCGGGAGGAGTTGTTGAGCTTGGTGGAGATGGACCAGGCCCATGGTCGAACCACCCACCTGTTGCTGGGTTCAACGATTTAGATCAGAACAGGGTTTGGGCCATGGTTTCACCAAGAAACAATAAAAGGCATTCCGAGGATTCGGCACACACCCCTGATTTCTTGCACGTTTGCTTTCTCTGCAAACGCCGTTTAGTACCCGGCCGTGACATCTACATGTACAGAGGTGATAGTGCTTTCTGCAGTTCAGAATGCCGTGAACAGCAGATGAAGCAGGATGAGAGAAAAGATAAGTGTCGTGTGGGTGTGGCATCAAAGAAACAAGTTGCTGCTAAGCCTTCTGGGTCTCAAGTTGCTACTACCAAAGGCGAAACCGTGGTTGCCTTGTAG 504 0.496 MLLGKRPRPPMKRTTSMSEITFDLNTTLGDDPNNPVKGPGGVVELGGDGPGPWSNHPPVAGFNDLDQNRVWAMVSPRNNKRHSEDSAHTPDFLHVCFLCKRRLVPGRDIYMYRGDSAFCSSECREQQMKQDERKDKCRVGVASKKQVAAKPSGSQVATTKGETVVAL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01163 167 ProSiteProfiles Zinc finger FLZ-type profile. 91 135 IPR007650 -
Pumo10g01163 167 PANTHER FCS-LIKE ZINC FINGER 5 1 156 - -
Pumo10g01163 167 Pfam zinc-finger of the FCS-type, C2-C2 84 134 IPR007650 -
Pumo10g01163 167 MobiDBLite consensus disorder prediction 143 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01163 Pumo-Chr10 15053584 15055124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01163 - - var:108331042 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01163 10 15053584 15055124 Pumo10g01163 10 15053584 15055124 ECH
Pumo9g01320 9 38793795 38794418 Pumo10g01163 10 15053584 15055124 PCT