Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01145 ATGGCCGGTGGGGTGGTTCCTGTCGATTCATCACCAAATACCAATGGCTTTGCTGGCAAGATAACGCTCTCAGTTATCATCACTTGCATCGTTGCTGCATCCAGTGGACTCCTTTTTGGATATGACATCGGAATTTCAGGAGGTGTCACAACAATGGTACCATTTCTGGAAAAATTCTTTCCAGATATATTAAGAAAGGCTGCTAGCACTGAAGTAAACATGTATTGTGTGTATGACAGTCAAGTGTTGACATTGTTCACATCTTCTCTGTACCTTGCTGGATTAGTGTCATCTCTTGCAGCTAGTCGAGTCACAGCGGCGTTGGGTCGGAGAAACACCATCCTCTTAGGTGGTGTCATCTTTCTTGTAGGTGGTGCCCTTAATGGAGGTGCTGAAAATATTGGTATGCTCATTTTGGGCCGTATCCTACTCGGATTCGGGGTTGGTTTCACTAATCAAGCTGCGCCGTTGTACCTTTCCGAAATCGCGCCACCGAAATGGCGAGGAGCTTTCAACACAGGCTTCCAATTCTTCCTATCAGTTGGAGTAGTCGCTGCAGGCTGCATAAACTTCGGAACCGCAAAGCACAGTTGGGGGTGGCGTGTCTCTCTTGGCCTTGCAGTGGTGCCTGCAGCAGTTATGACAGTTGGTGCCTTCCTAATAACTGACACTCCCAACAGCTTGGTTGAGCGTGGCAAAATAGACCAAGCCAGAAAAGCCCTGCGCAAAGCCAGAGGATCCACCATCGATGTGGAACCTGAATTGGAAGAACTCATTAGGTGGTCACAAATTGCAAAATCTGTGGAGCAGGAACCCTTCAAGACCATATTTGAGAGGCGGTATCGACCCCACTTGGTCATGGCATTTGCTATCCCATTTTTTCAACAGCTTACGGGGATTAACATCGTCGCTTTCTATTCTCCTAACCTCTTTCAATCTGTCGGTTTGGGACACGATGCCGCCTTACTTTCTGCCGTTATACTTGGAGCAGTCAACGTTGTTTCTCTCCTCGTCTCCACTGCTATTGTTGATCGCTTTGGTCGAAGGTTCTTGTTCATAACGGGTGGCATATGCATGTTTATTTCTCAGATTGCGGTGTCTGTTTTGCTAGCAGTGGTGACCGGTGTTCATGGTACAAAGGACATGTCGAAGGGCAGTGCAATTGTGGTGTTGGTGCTACTCTGTTTCTACTCAGCAAGTTTTGGTTGGTCATGGGGGCCTCTGACGTGGCTAATTCCGAGTGAAATTTTTCCGTTAAAAATCAGAACTACTGGACAAAGCATAGCTGTTGGTGTGCAGTTCATAACCGTATTTATATTATCCCAGACATTCTTGACAATGCTATGCCACTTTAAGTTTGCCGCTTTCTTGTTCTATGCGGGTTGGATTGTAGTGATGACAATCTTTATTATATTTTTCTTGCCAGAGACAAAAGGAATTCCTTTGGAATCAATGTACACCATATGGGATAAACACTGGTTTTGGCGCCGGTTTGTTAAAGGAGAAGTTGCCCAAGAAAATCTTCCCTGA 1530 0.4595 MAGGVVPVDSSPNTNGFAGKITLSVIITCIVAASSGLLFGYDIGISGGVTTMVPFLEKFFPDILRKAASTEVNMYCVYDSQVLTLFTSSLYLAGLVSSLAASRVTAALGRRNTILLGGVIFLVGGALNGGAENIGMLILGRILLGFGVGFTNQAAPLYLSEIAPPKWRGAFNTGFQFFLSVGVVAAGCINFGTAKHSWGWRVSLGLAVVPAAVMTVGAFLITDTPNSLVERGKIDQARKALRKARGSTIDVEPELEELIRWSQIAKSVEQEPFKTIFERRYRPHLVMAFAIPFFQQLTGINIVAFYSPNLFQSVGLGHDAALLSAVILGAVNVVSLLVSTAIVDRFGRRFLFITGGICMFISQIAVSVLLAVVTGVHGTKDMSKGSAIVVLVLLCFYSASFGWSWGPLTWLIPSEIFPLKIRTTGQSIAVGVQFITVFILSQTFLTMLCHFKFAAFLFYAGWIVVMTIFIIFFLPETKGIPLESMYTIWDKHWFWRRFVKGEVAQENLP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01145 509 Gene3D MFS general substrate transporter like domains 18 492 IPR036259 -
Pumo10g01145 509 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g01145 509 PRINTS Sugar transporter signature 414 426 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g01145 509 PRINTS Sugar transporter signature 391 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g01145 509 PRINTS Sugar transporter signature 138 157 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g01145 509 PRINTS Sugar transporter signature 36 46 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g01145 509 NCBIfam sugar porter family MFS transporter 23 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo10g01145 509 CDD MFS_STP 31 476 IPR044778 GO:0015145|GO:0015749
Pumo10g01145 509 ProSitePatterns Sugar transport proteins signature 2. 143 168 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo10g01145 509 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 16 500 IPR045262 GO:0015144
Pumo10g01145 509 SUPERFAMILY MFS general substrate transporter 30 484 IPR036259 -
Pumo10g01145 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 478 IPR020846 GO:0022857
Pumo10g01145 509 FunFam Sugar transport protein 13 18 492 - -
Pumo10g01145 509 Pfam Sugar (and other) transporter 29 489 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01145 Pumo-Chr10 14756638 14764556 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01145 52 500 Organic Solute Cotransporters AT1G34580 65.265 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01145 K24193 - gmx:100799418 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01145 10 14756638 14764556 Pumo10g01145 10 14756638 14764556 ECH