Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01142 ATGGCAATGCAGGCAGGGGACCTCTGCCAAAAACAAAATCCACATTCTCCCAATCCGATTTCCGATTTTGGTTCCTTCACTGGAGGGTTGTTTCTTGAGCCCAAAATTCCCGATTCATTTGTTCGTTCCATTTCGTTGAAGATTCACGCCACTCCCTTTTCCGAATCCAATCCTTGCCGCCAACGGAGAAGGGTTCCGGCAGCGTGTTTTTTGTCCGTGAGCTTGCCGAGTGCCAAACTCGTTACCGAACCCAAACTGCAAAATGGCGAACACGTGTCCGACCAGGAGACAACCTCAAACGGTGTCGTTCAGCAAAGAAAGGTTGGGATACGAGGAGGCAATGCCGTCAACACCACCAAGCATCTCTGGGCTGGTGCTATAGCCGCTATGGTCTCTAGAACTTGTGTTGCTCCACTTGAAAGGCTTAAGTTGGAGTACATACTTCGTGGTGAGAAGAGGAATATATTTGAGCTTATTAGCAAAATTGCTGCTTCTCAAGGGTTGAGAGGGTTTTGGAAAGGGAACCTTGTAAATATTCTGCGGACAGCTCCATTCAAAGCGGTTAATTTTTGTGCTTACGATACTTATAGAAAGCAGCTGCTTAGATTTTCTGGGAATGAGGAAACTACCAATTTTGAGAGGTTTATCGCTGGTGCTGCTGCTGGGATTACTGCTACCATTATTTGTCTTCCACTTGACACTATCCGGACCAAGTTGGTGGCACCTGGTGGAGAAGCTTTGGGCGGTGTAATTGGTGCTTTCCGATACATGATTCAAACTGAAGGATTCTTTTCTCTTTACAAGGGTTTAGTACCATCAATTATAAGTATGGCACCTTCTGGGGCAGTTTTTTATGGTGTATATGATATACTGAAATCAGCTTATCTGCATTCACCGGAAGGAATGAAGAGAATCCAGAATATGCATAAACAGGGTCAGGAACTGAGTGCCTTTGATCAACTTGAGTTGGGACCAGTAAGGACATTGTTGAATGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTTGAAGTGGTAAGGAGGCAACTTCAATTGCAAGTCCAGGCTACAAAATTAAGTTCATTTGCAACATTTGTCAAAATAGTTGAACAGGGAGGCATTCCAGCTCTCTATGCAGGACTTATTCCCAGCTTATTACAGGTACTTCCTTCAGCTTCCATAAGTTACTTTGTCTATGAGTTCATGAAGATTGTTTTGAAAGTGGAGTAG 1239 0.4447 MAMQAGDLCQKQNPHSPNPISDFGSFTGGLFLEPKIPDSFVRSISLKIHATPFSESNPCRQRRRVPAACFLSVSLPSAKLVTEPKLQNGEHVSDQETTSNGVVQQRKVGIRGGNAVNTTKHLWAGAIAAMVSRTCVAPLERLKLEYILRGEKRNIFELISKIAASQGLRGFWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITATIICLPLDTIRTKLVAPGGEALGGVIGAFRYMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPEGMKRIQNMHKQGQELSAFDQLELGPVRTLLNGAIAGACAEAATYPFEVVRRQLQLQVQATKLSSFATFVKIVEQGGIPALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01142 412 SUPERFAMILY Mitochondrial carrier 114 405 IPR023395 -
Pumo10g01142 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 199 IPR018108 -
Pumo10g01142 412 MobiDBLite consensus disorder prediction 1 20 - -
Pumo10g01142 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 323 408 IPR018108 -
Pumo10g01142 412 PANTHER SOLUTE CARRIER FAMILY 25 114 411 - -
Pumo10g01142 412 FunFam Mitochondrial substrate carrier family protein 115 412 - -
Pumo10g01142 412 Pfam Mitochondrial carrier protein 323 409 IPR018108 -
Pumo10g01142 412 Pfam Mitochondrial carrier protein 116 201 IPR018108 -
Pumo10g01142 412 Pfam Mitochondrial carrier protein 209 296 IPR018108 -
Pumo10g01142 412 PRINTS Mitochondrial carrier protein signature 174 194 IPR002067 GO:0055085
Pumo10g01142 412 PRINTS Mitochondrial carrier protein signature 121 134 IPR002067 GO:0055085
Pumo10g01142 412 PRINTS Mitochondrial carrier protein signature 134 148 IPR002067 GO:0055085
Pumo10g01142 412 PRINTS Mitochondrial carrier protein signature 267 285 IPR002067 GO:0055085
Pumo10g01142 412 PRINTS Mitochondrial carrier protein signature 332 354 IPR002067 GO:0055085
Pumo10g01142 412 PRINTS Mitochondrial carrier protein signature 224 242 IPR002067 GO:0055085
Pumo10g01142 412 Gene3D Mitochondrial carrier domain 112 411 IPR023395 -
Pumo10g01142 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 294 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01142 Pumo-Chr10 14687293 14691250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01142 28 391 Organic Solute Cotransporters AT5G64970 65.699 8.31e-165 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01142 - - gmx:100812227 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01142 10 14687293 14691250 Pumo10g01142 10 14687293 14691250 ECH