Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01132 ATGGCTTGGCGCTTCTTCTCCTTCCTCTCCAAAACCCTAAGCCCTAACCGCAACCCCTCTTCCTCCACAGCCCCATTCTCCACCTCCTTCCTCGTCACCAAAACCCCCAAAAAATTCAAGAAAAAACACAAACCCAAACCCAGCCCACGAACCACCCCGGTCCAGACCGAACCGAACCGCATCCCCCAATTCGAGCGCATTCTCCGCCGCGACGCCCTCCTCCGCTTTGTGACCCGCTCAAAGCAATTCCTCTCCACCCAGCCGGAGCACGTCCTCCGCCTCGACGACGCCGGCAAACTCCACCGCGAGCTCGGGTTCCCGCGCGGCCGCAAGGTCTCCCGCTTCATCCAGCGCCACCCCCTCCTCTTCCAAACCTACCGCCACACCGACGGCAAAACCTGGCTCGGCTTCACCGACCTCATGGAGGACCTCCTCGCAGAGGAACGCTCCCTCATGGACCAATTGGAACTTGACCGCGTCGAGAAGGTTCGGAAGCTTCTCATGATGTCCGCGCTCAACCGCATCCCCCTCAGCAAGATCCACCACTGCAGAACCCTCTTCGGCATCCCCGACGATTTCCGCGATAGGGTTTCCAAATACCCTAATTATTTCAATATTGTTATTGACGACAACGGGAAGAGGGTGCTGGAGTTGGTGAACTGGGACCCACTTTTGGCAGTGAGTGCGCTCGAGAGGGAGTTCGTGGTGGACGAGGATTCCGCTAAGAGGAAGTTTAGGTTTCCGGTGAAGTATGGGAAGGATTTGGATTTAGAATTGGATGATAGTAGGAAGCTTAATTTGTTGAACGCGCTTCCTTTGGTGTCTCCTTATTCCGATGGGAATAAGTTTGATGTGTGGACGTTGGAGGCGGAGAAGTATAGGGTTGGGGTGATTCATGAGTTCTTGAGCTTGACGTTGGAGAAGAGGGCGTCGATTCATCACCTTGTGGAGTTTAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCAGATGCTGCGGAAGCAGCCACGAGCGTTTTACTTGGCCGGAACCGAGATGAATTGGGCTGTGTTCTTGAAGGATGCGTATGATGGGAATGGGGTTTTGATTGAGAAGGACCCCCAGGTGGTGTTTAATGAGAAGCTTTATAAGTATGCTCAGGTGGATCAAATGGAACCTGGGTCTGATGATGGGGTGGAAGAGCAACATTTGACTTGA 1197 0.5347 MAWRFFSFLSKTLSPNRNPSSSTAPFSTSFLVTKTPKKFKKKHKPKPSPRTTPVQTEPNRIPQFERILRRDALLRFVTRSKQFLSTQPEHVLRLDDAGKLHRELGFPRGRKVSRFIQRHPLLFQTYRHTDGKTWLGFTDLMEDLLAEERSLMDQLELDRVEKVRKLLMMSALNRIPLSKIHHCRTLFGIPDDFRDRVSKYPNYFNIVIDDNGKRVLELVNWDPLLAVSALEREFVVDEDSAKRKFRFPVKYGKDLDLELDDSRKLNLLNALPLVSPYSDGNKFDVWTLEAEKYRVGVIHEFLSLTLEKRASIHHLVEFKEEFSLTKHTYQMLRKQPRAFYLAGTEMNWAVFLKDAYDGNGVLIEKDPQVVFNEKLYKYAQVDQMEPGSDDGVEEQHLT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01132 398 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 40 383 IPR045040 GO:0003723
Pumo10g01132 398 MobiDBLite consensus disorder prediction 35 59 - -
Pumo10g01132 398 Pfam Plant organelle RNA recognition domain 60 381 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01132 Pumo-Chr10 14571634 14573332 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01132 - - gmx:100813429 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01132 10 14571634 14573332 Pumo10g01132 10 14571634 14573332 ECH