Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01125 ATGGAGTCCCAGAGAGATCGCAGGACAGATGCTCTTGGAGACCTTCGAGTCCTTCCCGACGAAATCCTCTGCTCTATTTTGGAACGTCTCAGTCCCCGAGATGCTGCTCGCATCGCTTGCGTTAGCAGTGTTATGTACATACTGTGCAATGAAGAACCACTCTGGATGAGTCTATGCTTAAAAGGAGCATCTGGTTTGCTTCAATACAAAGGCTCTTGGAAGAAAACTGCCCTGCATAATGAGAATCTGCCAGACAAATACAAAGAATACCATCGAGGACCTTTATATTTTGATGGGTTCAACTCTTTATTTTTGTACAGGAGATTATACCGCTGTCATACCACATTGGATGCATTTTATGCAGACACTGGAAACGTGGAAAGAATAAAAGACATCTCACTGAAGGACTTCTATAATGAGTATGATGCAAAGAAACCGGTTATGCTCACTGGATTGGCTGATACATGGCCCGCCAGGCATAAATGGACAACTGATCAGCTGTTGCTAAACTATGGAGATGTAACATTTAAAATTTCTCAAAGGAGCTCCCGGACGATCTCCATGAAGTTCAAGGATTATGTCTCTTACCTGAAAGTTCAGCATGATGAAGATCCCTTGTATATTTTTGATGAAAAGTTTGGTGAAGCTGCACCTAGCTTATTGAAGGATTATTGTGTGCCACATCTTTTTCAAGAAGACTTCTTTGATATCTTAGATACAGATAAACGACCATCCTATAGGTGGCTCATAATTGGACCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACCAGTGCATGGAATACTCTTCTTTGTGGCCGTAAAAGGTGGGCATTATATCCTCCAGGAAAAGTGCCTTTGGGTGTGACAGTGCATGTTAATGAAGAAGATGGTGATGTCAATGTTGAGACTCCATCATCACTGCAGTGGTGGCTAGACTTTTATCCTCTTCTTGCCTGA 969 0.4272 MESQRDRRTDALGDLRVLPDEILCSILERLSPRDAARIACVSSVMYILCNEEPLWMSLCLKGASGLLQYKGSWKKTALHNENLPDKYKEYHRGPLYFDGFNSLFLYRRLYRCHTTLDAFYADTGNVERIKDISLKDFYNEYDAKKPVMLTGLADTWPARHKWTTDQLLLNYGDVTFKISQRSSRTISMKFKDYVSYLKVQHDEDPLYIFDEKFGEAAPSLLKDYCVPHLFQEDFFDILDTDKRPSYRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNEEDGDVNVETPSSLQWWLDFYPLLA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01125 322 Gene3D - 4 89 - -
Pumo10g01125 322 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 12 318 - -
Pumo10g01125 322 ProSiteProfiles F-box domain profile. 12 58 IPR001810 GO:0005515
Pumo10g01125 322 SUPERFAMILY F-box domain 5 66 IPR036047 GO:0005515
Pumo10g01125 322 SMART fbox_2 18 58 IPR001810 GO:0005515
Pumo10g01125 322 SUPERFAMILY Clavaminate synthase-like 119 301 - -
Pumo10g01125 322 ProSiteProfiles JmjC domain profile. 215 322 IPR003347 -
Pumo10g01125 322 Gene3D Cupin 110 322 - -
Pumo10g01125 322 Pfam Cupin-like domain 143 290 IPR041667 -
Pumo10g01125 322 Pfam F-box-like 17 61 IPR001810 GO:0005515
Pumo10g01125 322 FunFam F-box protein At1g78280 106 322 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01125 3 322 Glycosyltransferase AT1G78280 72.812 1.22e-169 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01125 - - gmx:100792541 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01125 10 14454575 14459123 Pumo10g01125 10 14454575 14459123 ECH