Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01115 ATGTTTCGAGGGATGAGCCTGAGCGTGGAGGCTCCCAAGAGTTGGTGTTTGTGTTTCAAACCAAAAACAAAAGCAAACAATATTACAAATAAGATGCGAGCGGCACTCCCTCGCAGCCGCCAAGGTTCCTTATTCTCTTATCGTGCTTCCCTGCCAGGATATACTAGCACTATTACCAGCGTGCTCCGTACTGCTTCCGAGACTAACGCGATGGCGCTTACTTTTGAGGTTCTTGGCAGATTCAACCGTGCTCGTGCTGCTCGGTTGACACTCCCTCATTTTGTGTGCCAGACTCCTTTGTTTATGCCTGTGGGCACACAAGGAACAATAAAGGGATTGACAAATAGCCAGCTTGAGGATATTGGTTGCCAAATAATACTTGGAAACACATATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGTCTTCATAATTTTATGAATTGGCAACGGGCTCTGCTTACAGACTCTGGTGGCTTTCAAATGGTTTCGCTGTTGCATCTTGCTGATATCACAGAAAAAGGTGTGACATTTCAGTCACCAGTAGATGGAAAACCAATGCTTCTAACACCTGAGGAATCAATTCAAATCCAAAATAGAATTGGAGCAGATATCATTATGGCTCTCGATGATGTTGTAAAGACCACCATTACTGGTCCACGAATAGAGGAAGCTATGTATCGAACACTTAGATGGATAGACAGATGTATAGCAGCTCACAAGAGACCTCATGATCAGAACTTGTTTGGTATTGTGCAAGGTGGTTTAGATCCTGTATTGAGGGATATCTGTGTCAAAGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGATAAACCACGATATGTTATGGTCAGAATGACTTCATCTTATCAACCTTTTTTTTTTAAAATATTTCAGTATAATGTCATCACATTTTGCATGAACTTTCAGGGAGTTGGTTATCCACTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGACTGTGTGTATCCTACCCGCACAGCACGCTTTGGCACTGCTCTCGTTCCTGAGGGAGTATTGAAACTAAAACACAAAGCAATGGCTGACGACACCCGTCCAATTGATCCTACTTGCCCTTGCATGGTTTGCAAGAACTACACCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGGTCTCAACTTTTGTCATATCATAATTTATACTACATGTTGCAGCTCAGTAGGAATCTACACTCTTCAATAGTTGAAGGAAGGTTCCCAGAGTTTGTATGTGACTTTCTACGCAAAATGTTTCCAAAAGGCGATGTTCCTGAATGGGTCTGCGATGCTATGGAGGTGGCTGGAATCGACATTTCTTCCTGCTGTGCTCCGTTTTCATCATGCCAAGAATATTATTCCAAAAGTATGCCCGAAGAAGTTAGTTTAGTGAGGTGA 1530 0.4327 MFRGMSLSVEAPKSWCLCFKPKTKANNITNKMRAALPRSRQGSLFSYRASLPGYTSTITSVLRTASETNAMALTFEVLGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWQRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPVLRDICVKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMVRMTSSYQPFFFKIFQYNVITFCMNFQGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHKAMADDTRPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHSSIVEGRFPEFVCDFLRKMFPKGDVPEWVCDAMEVAGIDISSCCAPFSSCQEYYSKSMPEEVSLVR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01115 509 Pfam Queuine tRNA-ribosyltransferase 341 462 IPR002616 GO:0006400|GO:0016763
Pumo10g01115 509 Pfam Queuine tRNA-ribosyltransferase 83 315 IPR002616 GO:0006400|GO:0016763
Pumo10g01115 509 NCBIfam tRNA-guanine transglycosylase 343 462 IPR002616 GO:0006400|GO:0016763
Pumo10g01115 509 NCBIfam tRNA-guanine transglycosylase 75 315 IPR002616 GO:0006400|GO:0016763
Pumo10g01115 509 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 67 315 - -
Pumo10g01115 509 Hamap Queuine tRNA-ribosyltransferase [tgt]. 73 461 IPR004803 GO:0008479|GO:0101030
Pumo10g01115 509 Gene3D - 70 322 IPR036511 GO:0006400|GO:0016763
Pumo10g01115 509 Gene3D - 333 464 IPR036511 GO:0006400|GO:0016763
Pumo10g01115 509 SUPERFAMILY tRNA-guanine transglycosylase 71 461 IPR036511 GO:0006400|GO:0016763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01115 K00777 - gmx:100806874 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01115 10 14344014 14352157 Pumo10g01115 10 14344014 14352157 ECH