Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01105 ATGGCCCAGCAAAAGCGGCTAAGAAATTTGGCACAGAACCTCAAAGACAAAGCCTCGGTCATCACAGCAGCGCTATCCATGAAGCGCCACGTGTCCTCCGTCCGCGTCCACGTGCTCCGCGCCACCACGCACGCCCTCGCCGCGCCACCCTCCGAGGAAACAATCAACGCCGTCCTCGCGGTCGGGCACGGCTCCCACCGCCACCCGCGCGCGTGCATCGACGCGCTCATGGATCGCCTCCACAGCACTCGCAGCGCCACCGTGGCCCTAAAATGCCTCTTCACGCTCCACAACGTCGTCGTAAAGGGACCCTTCACATTGAAAGACCAACTCTCCTCTTACCCTTCCTACGGTGGCCACAATTTCTTGAACCTCTCGACCTTCCGCGACGACTCGGAGTTGGAATCGGTGGAACTCAGTTCGTGGGTGAGGTGGTACGCGGGCGTGTTGGAACATAGCTTAACGGTTTCAAGAATCTTAGGTTATTACTTGAACGATTCTTGCGAATCCCAAGAAAGGAAGAAGGGTTTGGTTTCGAACGCGTCGAATGCGGATTTGTTGTACAAGTTGGAAGCTCTCGTGGGTTTCGTCGAGCAAATTAGTCACGTGCCCGATTCGCTGCACCTTCAGAGGAACGAGTTGGTGTACGAGGTTGTGAGATTGGTGGGTGAGAATTATAGGAGCGTGCAAGGTGAGATTTTGTTGCGAGTGGAAGAGATTGGGGAGAGAATGGAGGATTCTGATGTGGGCGAGTTGAACGAGTTGGTGGGGTATTTGGAAAGATTGGAACAGAGTCATGAAAAGTTGGTGCTTTTGTTTGTGAATAGGAGAAAGAACAATGGGTTTTGGGATTTGGTTAAGAAGACTAAGGAGAAGGGAATGGAGAAGAAGAAGGAGATTGAAGGGAAGTGGCTCACGGTGGTGGTGACAGGGAACGCCGCCGAGTTGACTCGGTCCACGAACCCGTTTCTTGACCCGGGGCAACTCAGTCCGGTCCCACGGTTAAGTTTCGCAACGGTAAGGTGA 1026 0.539 MAQQKRLRNLAQNLKDKASVITAALSMKRHVSSVRVHVLRATTHALAAPPSEETINAVLAVGHGSHRHPRACIDALMDRLHSTRSATVALKCLFTLHNVVVKGPFTLKDQLSSYPSYGGHNFLNLSTFRDDSELESVELSSWVRWYAGVLEHSLTVSRILGYYLNDSCESQERKKGLVSNASNADLLYKLEALVGFVEQISHVPDSLHLQRNELVYEVVRLVGENYRSVQGEILLRVEEIGERMEDSDVGELNELVGYLERLEQSHEKLVLLFVNRRKNNGFWDLVKKTKEKGMEKKKEIEGKWLTVVVTGNAAELTRSTNPFLDPGQLSPVPRLSFATVR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01105 341 Gene3D - 5 163 IPR008942 -
Pumo10g01105 341 SUPERFAMILY ENTH/VHS domain 34 161 IPR008942 -
Pumo10g01105 341 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Pumo10g01105 341 FunFam Putative clathrin assembly protein At4g40080 6 163 - -
Pumo10g01105 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 300 IPR045192 GO:0048268|GO:0072583
Pumo10g01105 341 Pfam ANTH domain 35 202 IPR011417 GO:0005543
Pumo10g01105 341 SMART enth_2 32 164 IPR013809 -
Pumo10g01105 341 CDD ANTH_N_AP180_plant 35 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01105 Pumo-Chr10 14218072 14219666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01105 - - gmx:100788852 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01105 10 14218072 14219666 Pumo10g01105 10 14218072 14219666 ECH