Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01104 ATGGGTAGCTTGAAAGGAGACGGTGGCAGTAATCTTACCGAAGCTCTTTTGCCAACAGGAGATGCACAACAACAAGATGATGAGAAACAAAGATTTGGTAACAAACTGTGGCTTGAAACGAAGAAGCTATGGCTCATTGTGGGGCCCTCTATCTTGAGCCGCCTCGCATCATTCACCATGAATGTTGTTACCCAAGCCTTCGCCGGTCACTTGGGTGATGTTCAACTCGCTGCCATTTCTATCGCTAACACTGTTATTGTCGGCTTCAATTTCGGCCTCCTGTTGGGGATGGCAAGCGCGTTGGAGACACTGTGCGGGCAAGCGTTTGGGGCGAAGAGATACCACATGATGGGGATATACATGCAGAGGTCGTGGATTGTTCTGTTCATGTGCTGTTTCCTGCTGTTGCCGTTTTATGTTTTCGCAACGCCGCTTCTGAAATTCCTAGGACAGCCAGATGACGTGGCAGAGTGGAGCGGAGTGGTGGCGGTGTGGCTGATTCCTCTGCATTTCAGTTTCGCGTTTCAGTTTCCCCTGCAAAGGTTCCTACAGTGCCAGCTGAAGACAGCAGTGATTGCTTGGGTTGCTTTGCTGGGTTTGGTGGTCAATGTGGTCACAAGTTGGCTCTTAATTTATGTCTGGGATTTTGGACTTTATGGCGCAGCTATTTCTTTGGACATTTCGTGGTGGGTTTTGGTTTTTGGCATGTATGCTTATGCTGCCTATGGTGGATGCCCATTAACTTGGACTGGTTTCTCCACGGAAGCATTTTCTGGACTCTGGGAATTCCTTAAACTCTCTTCCGCTTCTGGGGTCATGTTATGCTTAGAGAACTGGTACTACAGGATATTGGTACTTATGACAGGCCAGTTGGAGAATGCCACTATCGCTGTTGATGCCTTGTCTGTATGTATGACCATCAACGGGTGGGAAATGATGATTCCCCTGGCTTTCTTCGCCGGTACTGGGGTAAGGGTGGCGAACGAGTTAGGTGCAGGCAATGGGAAAGCAGCAAAATTTGCAACGCAAGTATCAGTGTTACAATCAACAGTGATTGGGTTGATATTTTGCGTTCTGATAATGATATTCCATGAATACATTGCATACATATTCACCACCAGCTCTTCCGTCCTACAAGCCGTTGACAACATGGCATTCCTCTTAGCCGTCACCATTCTTCTCAACAGTGTGCAGCCCGTTCTGTCAGGAGTAGCTGTTGGTTCCGGATGGCAAGCATACGTAGCATACATAAACATAGGATGCTACTACCTTATCGGGCTCCCACTCGGAATTACCATGGGATGGGTCTTCAAAAGTGGTGTCACTGGCATCTGGGGGGGCATGATCTTCGGTGGCACAGCAATCCAAACGCTGATACTCATCATAGTAACGGCACGATGTGATTGGGAAAAGGAGGCGGAGAAAGCTTGCTTTCGTGTAAATAAGTGGTCAAAATCTAACTCCAATGGCCAACTGGAGACCTCCAATTAA 1491 0.4795 MGSLKGDGGSNLTEALLPTGDAQQQDDEKQRFGNKLWLETKKLWLIVGPSILSRLASFTMNVVTQAFAGHLGDVQLAAISIANTVIVGFNFGLLLGMASALETLCGQAFGAKRYHMMGIYMQRSWIVLFMCCFLLLPFYVFATPLLKFLGQPDDVAEWSGVVAVWLIPLHFSFAFQFPLQRFLQCQLKTAVIAWVALLGLVVNVVTSWLLIYVWDFGLYGAAISLDISWWVLVFGMYAYAAYGGCPLTWTGFSTEAFSGLWEFLKLSSASGVMLCLENWYYRILVLMTGQLENATIAVDALSVCMTINGWEMMIPLAFFAGTGVRVANELGAGNGKAAKFATQVSVLQSTVIGLIFCVLIMIFHEYIAYIFTTSSSVLQAVDNMAFLLAVTILLNSVQPVLSGVAVGSGWQAYVAYINIGCYYLIGLPLGITMGWVFKSGVTGIWGGMIFGGTAIQTLILIIVTARCDWEKEAEKACFRVNKWSKSNSNGQLETSN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01104 496 CDD MATE_eukaryotic 39 475 IPR045069 GO:0042910|GO:1990961
Pumo10g01104 496 PANTHER MULTIDRUG RESISTANCE PROTEIN 35 469 - -
Pumo10g01104 496 NCBIfam MATE family efflux transporter 49 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo10g01104 496 Pfam MatE 49 209 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo10g01104 496 Pfam MatE 271 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01104 Pumo-Chr10 14204581 14212798 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01104 K03327 - gmx:100500204 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01104 10 14204581 14212798 Pumo10g01104 10 14204581 14212798 ECH