Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01103 ATGGGAAATATCCTCAACGAAACAGAGCATCCTCTGCTGATACAGTCAACGCTGCCACAACCACAACAACACGGATCCAACACTCACTCACTCTTCCAACGGTCATGTTCCGAATCCAAGAAGCTCTGGCACATCGCCGCCCCCTCCATCTTCACCCGCCTCGCCATGTTCTCCATCACCGTCGTCACTCAGTCCTTCGCCGGCCACCTCGGCGACCTCTACCTCGCCGCCATCTCCATCGCCTGCACCGTCCTTATCTCCATCACCTTCGGTTTCTTGTTGGGCATGGCGAGTGCGTTGGAAACACTTTGCGGCCAGGCCTACGGCGCCGGGCAGCACCGCATGTTGGGCGTTTACTTGCAACGCTCGTGGGTTGTTCTGTTCCTGTCCTCCATTCTGATGTTGCCGGTGTTCATTTTTGCAACGCCGGTGTTGAAGTTGATTGGGCAGCCCGTTGCGGTGGCGGAGCAGGCGGGGCTGGTGGCGGTTTGGTTGATCCCGTTTCACCTGAGCTTCCCGTTTCAGTTCACGTTGCAGCGGTTCCTGCAGTGCCAGTTGAAGACCGGCATCATTGCTTGGGTTTCAGGGGTGGCACTTGCGATTCATGTTTTAGTGAGTTGGGTTTTTGTTTATAGGATGAGAATTGGGATTGTTGGCACTGCTCTTTCTATTGGTTTCTCGTGGTGGCTCTCGGTTTTGGGAATGCTCGGGTATACACTCTTTGGTGGGTGCCCGCTTTCGTGGACTGGTTTTTCTGCTGAAGCTTTTGTTGGTCTCTGGGAATTCTCTAAACTCTCTTTGGCTTCTGGGGTCATGCTTGCGTTAGAGAATTTCTATTACAGACTGTTGCTTATAGTGTCTGGGTATATGCATAACACTGAGATTGCGATTGATGCACTTTCTGTTTGTGTGACTATTTATGGTTGGGAATCCATGATACCGCTTGCATTTTTGGGTGCAACCGGGGTGCGTGTAGCAAACGAGCTTGGCGCAGGCAATGCAAAAGGTGCAAAATTTGCAACTGTGGTTTCTGTGGTAACTACTTTATTGGTGGGATTTATATTTTGGTTGGTAATTGTGGCCTTCAACAAGAATCTTGCCTTGATTTTTACATCGAGCTCTTCCGTTATCCAAATGGTCAATGAGCTAGCAATGTTGTTAGCTTTTACTGTTCTTCTTAATTGCATTCAACCAGTTCTTTCAGGGGTGGCAGTTGGGTCTGGTCGTCAAGCAGTAGTGGCTTATATAAACATTGGCAGTTACTACTTGATTGGAATACCTCTTGGGGTTCTCCTAGGCTGGTTGCTTCCTTCGGGTATTGTTGGTATGTGGACTGGAATGATGAGTGGAACGGTGGTTCAAACATTGATCTTGGCTGTTATTACGTTGAGATATGATTGGGAAAAAGAGGTACGGAAAGCCCAAATTCTTATTAAAGAGGAAGCAACATCCAACCAATAA 1461 0.488 MGNILNETEHPLLIQSTLPQPQQHGSNTHSLFQRSCSESKKLWHIAAPSIFTRLAMFSITVVTQSFAGHLGDLYLAAISIACTVLISITFGFLLGMASALETLCGQAYGAGQHRMLGVYLQRSWVVLFLSSILMLPVFIFATPVLKLIGQPVAVAEQAGLVAVWLIPFHLSFPFQFTLQRFLQCQLKTGIIAWVSGVALAIHVLVSWVFVYRMRIGIVGTALSIGFSWWLSVLGMLGYTLFGGCPLSWTGFSAEAFVGLWEFSKLSLASGVMLALENFYYRLLLIVSGYMHNTEIAIDALSVCVTIYGWESMIPLAFLGATGVRVANELGAGNAKGAKFATVVSVVTTLLVGFIFWLVIVAFNKNLALIFTSSSSVIQMVNELAMLLAFTVLLNCIQPVLSGVAVGSGRQAVVAYINIGSYYLIGIPLGVLLGWLLPSGIVGMWTGMMSGTVVQTLILAVITLRYDWEKEVRKAQILIKEEATSNQ 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01103 486 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 467 - -
Pumo10g01103 486 Pfam MatE 270 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo10g01103 486 Pfam MatE 48 208 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo10g01103 486 NCBIfam MATE family efflux transporter 48 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo10g01103 486 CDD MATE_eukaryotic 38 473 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01103 Pumo-Chr10 14181614 14195413 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01103 K03327 - gmx:100814869 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01103 10 14181614 14195413 Pumo10g01103 10 14181614 14195413 ECH