Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01070 ATGTTGGGAAGGGCAGCAACCAATGCATATTCATGGTGGTGGGCAAGCCACATCAGGACAAAGCAATCCAAATGGCTAGAACAAAGTCTCCAAGATATGGAGGATGTGATGGCTGAAACCCTCAGCATCATTCATAATGAAGGAGAGTCATTTTCCCAAAGGGCAGAAATGTACTACAGGAAGAGGCCACAGCTGGTAGGTTATGTGGAAGAAGTCTTTCGCTCATATAGAGCATTAGCAGAGAGATATGATCTTCTATCAAAGGAGCTCCAAAGTGCCAACCGCACTATTGCCATTGTTTTCCCAGAACAAATCCATTATAGAATTGATGAGGATGATGCTGAAGAAAGTTTCCCTGGAACAAATTCATCATCTCAAGACCCCAACAATCAATCACCAAAACCAGGCATTCCTAAAGCTCCAAATATCCCAAAGAAGAATTTTAGAAGCCCATCAATGTTGCTTTCTAGGAAGGGTCCACTTAGGAGGGTTGCTAGCTCTGTAAAATCCCCTCCCACAAGTCCTAGTTCAGGTCTGAGTAAGGCTGAAGCACTAGCAGAAGTTGACAAGCTTCAGAAAGAAATGTTGGCACTACAGACTGAGAAAGAGTTTGTAAGGAGCTTGTATGAAAATTCCTATGAAAAGCACTGGGAAATTGAAGACCGGATTACAGAAATGCAAAAAAGAGTTTACAGCTTGCAAGATGAGTTTGACATTAATACAATCATAGAAGATAACGATGCGCAAGCTTTGATGGCTGCAACAGCTCTAAAGTCATGCAAAGAGACCCTGGCTAAGTTGCAAGAGGCACAGGCACAATCATCTGAAGAGGCTAAGGAATCATACCAAAGGGTTAAGGAAGCTCATGACAAGTATGAAACCCTTAGAGGCCAATTCATTTCTAAACACAAGAGTCAACAAGACCAAGGAACAGAACCAAAAGGCATAGAGGAAGAAGACATGTCTAGCTTGGAAGAAGAAATGCATGAGCATGACACGGGGTTGTTGCGAGACACAATTAAGGAAAAGCTTCACATAGATTCAGGTAGCTCCCTCACTATGACAGAAATGGCAGAGAAGATTGATGAGCTTGTAAATAAGGTTGTTACACTGGAAACCGCGGTCTCTTCTCAGACAGGCTTGGTAAAGAGACTGAGATCAGAAGCAGATGAACTTCAAAAAAATATACTGAGCTTGGAAGAGGACAAGGATGTGCTGATAGAAGATTCAGAAGGAACCAAAAAGAAGCTGAAAGAAGTGGAGGAGGAGTTGAGGAGAGTTAAAACTCTCAATCAAAGTGTCAAAAGGCAAGACAACAGCCTCCAAACACACTTTACTGAAGCTAGTTGTGAGCTTGAACATCTTTCAGGAAAATTGAATGATGTGAAGCTAGATGAGGAGGGGGAGAACTTGCTACTTAACAAAAACAAAAGTGCACCTGATGGAGAACAAAATGAGGAGTCTGAAAGACCAGGTGATAACACAGCAACCATGAAGGATGTTGAGACAACAAAGGAGGAAAAGGAAGATTGTAGTGTAAATCTTGGTGATGTTAGAAATGAAGATAACAAGTCCAATTCGAAAGAAAATATTGATTTTAGGACTGAAGAGATTCCAGAGCAAATGCTGCAGAATAAGGATGATTTGTCTGAGGCAAGGAGTAATCTTGACACTGAATCACTTGATCAGGGGACTGGTGAGGAAAAAGATCAATCTAACTGGAGTCAGATGATTGCAAGTGGATTAGATGGCAGAGAAAAGATTCTGTCGGAATTCACATCAGTTTTAAAGAACTACGAGGATGTAAAGGACGAGCTCAATGATGTGGTGAAGAAAAATCGGGACAGCATTTTTAAGTTGTCACTTCAGGTAAGGCAATTGAAGGATACTGTTCAAACTAAAGATAAAGAGATAAATCTTTTGCAACAGAAGCTGACCTGTTCAGAAACAAATCCAGATGAAAGTCCTTGCACCCCTCTCACAGATTATAAATACACACCACAAGAAGCACTTCTTGGAACTGCAGCTCAAGGAACAGACCCTCGGGACCCTGAAAATCCATCTTCAAACACAGATGCAAGTGCAGTTAGTACTTCTTATGCAGTGCAACACCAACAACATGTTGAAAACAGAGGAAAGATTGGCATATTAGTGAAGGTGAGACCAAACCAGCTTGATAAGAGCCAATCACTTTCAACCTTGGAAAAGAAATTTCGTTCAGACATTGATGATTTGCTAGAGGAGAACTTGGAGTTCTGGTTGAGGTTTAGCACCTCAGTGCACCAGATTCAAAAGTTCCGAAATTCTATACAGGACTTAAAATTTGAGCTTAAAACAATAAGGGATGACAATATGTCCCAAGAGAACTCAAGTTCTATACAATCTGAGATAAAACCAATATTTAGACACCTGAGGGAGATAAGAACTGAGTTATCACTATGGCTGGAGCACAGTGAAGTGTTGCATGAAGAGTTGCAAGGTAGGCATCCATCCTTGTGCACCTTACAAGATGAAATAGCAAGAACAGCCAATCCAAATTCTGCATCAAATAATATGGCAAAACTAAGTGGGTATCAGGCCGCAAAGTTTCAAGGTGAGGTTCTCAACATGAAGCAGGAGAACAACAAGGTTTCTACTGAACTGCAAGCAGGTGTCAGTTTTGTGAAGGAACTGAAAGATCAGGTTGAGAAGATGCTAGAAGAACTGACTCAGGAAATTGAGGTTAACAATCATGACAATATGAAACACTCCACAAGTCGTCCTAGAATACCCTTGAAGTCTTTTCTGTTTGGAATCAAGTTAAAGAAGCAAAAGCAATCGGTCTTCTCATGTGTAAATTCAACAACGCAGAAACAATACAGGGAACTAACAGCGGCTGAAGATGCCCCTATATAG 2895 0.4107 MLGRAATNAYSWWWASHIRTKQSKWLEQSLQDMEDVMAETLSIIHNEGESFSQRAEMYYRKRPQLVGYVEEVFRSYRALAERYDLLSKELQSANRTIAIVFPEQIHYRIDEDDAEESFPGTNSSSQDPNNQSPKPGIPKAPNIPKKNFRSPSMLLSRKGPLRRVASSVKSPPTSPSSGLSKAEALAEVDKLQKEMLALQTEKEFVRSLYENSYEKHWEIEDRITEMQKRVYSLQDEFDINTIIEDNDAQALMAATALKSCKETLAKLQEAQAQSSEEAKESYQRVKEAHDKYETLRGQFISKHKSQQDQGTEPKGIEEEDMSSLEEEMHEHDTGLLRDTIKEKLHIDSGSSLTMTEMAEKIDELVNKVVTLETAVSSQTGLVKRLRSEADELQKNILSLEEDKDVLIEDSEGTKKKLKEVEEELRRVKTLNQSVKRQDNSLQTHFTEASCELEHLSGKLNDVKLDEEGENLLLNKNKSAPDGEQNEESERPGDNTATMKDVETTKEEKEDCSVNLGDVRNEDNKSNSKENIDFRTEEIPEQMLQNKDDLSEARSNLDTESLDQGTGEEKDQSNWSQMIASGLDGREKILSEFTSVLKNYEDVKDELNDVVKKNRDSIFKLSLQVRQLKDTVQTKDKEINLLQQKLTCSETNPDESPCTPLTDYKYTPQEALLGTAAQGTDPRDPENPSSNTDASAVSTSYAVQHQQHVENRGKIGILVKVRPNQLDKSQSLSTLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFRNSIQDLKFELKTIRDDNMSQENSSSIQSEIKPIFRHLREIRTELSLWLEHSEVLHEELQGRHPSLCTLQDEIARTANPNSASNNMAKLSGYQAAKFQGEVLNMKQENNKVSTELQAGVSFVKELKDQVEKMLEELTQEIEVNNHDNMKHSTSRPRIPLKSFLFGIKLKKQKQSVFSCVNSTTQKQYRELTAAEDAPI 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01070 964 Coils Coil 624 644 - -
Pumo10g01070 964 Coils Coil 181 208 - -
Pumo10g01070 964 MobiDBLite consensus disorder prediction 681 700 - -
Pumo10g01070 964 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Pumo10g01070 964 MobiDBLite consensus disorder prediction 675 700 - -
Pumo10g01070 964 Coils Coil 596 616 - -
Pumo10g01070 964 Coils Coil 76 96 - -
Pumo10g01070 964 MobiDBLite consensus disorder prediction 556 573 - -
Pumo10g01070 964 MobiDBLite consensus disorder prediction 298 330 - -
Pumo10g01070 964 MobiDBLite consensus disorder prediction 114 181 - -
Pumo10g01070 964 PANTHER PROTEIN NETWORKED 2D 1 959 - -
Pumo10g01070 964 MobiDBLite consensus disorder prediction 118 133 - -
Pumo10g01070 964 MobiDBLite consensus disorder prediction 473 573 - -
Pumo10g01070 964 Coils Coil 763 783 - -
Pumo10g01070 964 Coils Coil 257 295 - -
Pumo10g01070 964 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Pumo10g01070 964 MobiDBLite consensus disorder prediction 480 555 - -
Pumo10g01070 964 Coils Coil 354 437 - -
Pumo10g01070 964 Coils Coil 885 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01070 Pumo-Chr10 13820981 13825048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01070 - - gmx:100805236 1560.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01070 10 13820981 13825048 Pumo10g01070 10 13820981 13825048 ECH
Pumo9g01435 9 41761892 41763004 Pumo10g01070 10 13820981 13825048 PCT