Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01068 ATGGTTTCTTCAATAGGTACGCTGTGTTCAAGCTTCATCACAGTACCTCCATCCTCCTCCAGAACTCCATCCTACTGCTCATTTCCTTCTCGTAGAATCATCACGCCGAGAATGGGACCATATCCGGTCCAGGCCCAGGCCCAGCCCAAGCCCAAGGAGGCCAAGCTCTGGGGTGGCAGGTTCGAGGAGGGCGTAACCGACGTGGTCGAGAGGTTCACCGAGTCGATCTCCTTCGACAAGCAGCTCTACAAACAAGACATAATGGGAAGCAGAGCACACGCTTCAATGCTCGCTCACCAGGGTTTGATAAGCGCGAGTGACAGTGACTCCATTCTCAAAGGTTTGGATGAAATTGAGAGGCGCATTGAGAATGGAGAGTTCAATTGGAGAGCTGACAGAGAGGATGTGCACATGAACATTGAGGCTGCGCTCACCGACATGATCGGTGAGCCTGCCAAGAAGCTTCACACGGCGCGCAGTCGGAACGATCAGGTCTTGACGGACTTTCGCCTCTGGTGTCGTGACGCCATTGACAAGATCCTCGTGAGCATGAAGCAGCTTCAGGTCTCGCTGCTGACTCTGGCTTTGAACAATGAGGGCCTCATTGTTCCTGGTTATACTCACTTGCAGCGCGCGCAGCCGGTTTTGCTGCAGCATCTTCTGTTGGCTTATGTTGAGGAGATTGAGCGTGATGCTGGGCGTTTGGTAGACTGTAGAGCGAGAATGAATTTCTGCCCCTTAGGGGCTTGTGCCTTGGCCGGTACAGGTCTTCCCATTGATCGATTCATGACTTCGGAAGCTTTAGGATTTACGGCTCCCTTGAGGAATAGTATAGATGCAGTTTCGGACCGAGATTTTGTACTGGAATTTCTTTCTGCTAATGCCATCACAGCTGTGCATCTTTCTCGGCTTGGTGAAGAATGGGTATTGTGGGCTTCGGAGGAATTTGGGTTTATCACACCAAGTGACTCTGTTTCAACTGGAAGTAGTATAATGCCTCAGAAAAAGAACCCAGATCCAATGGAACTTGTTCGTGGGAAGTCTGCCAGAGTCATAGGGGATCTGGTTACTCTTCTCACATTGTGCAAAGGACTTCCTCATGCTTACAACCGTGATTTGCAGGAGGACAAAGAGCCAGTATTTGACAGCGTTAAAACTATTTTGGGGATGCTCGAGGTATCAGCTGAATTTGCACTAAAAATTACTTTCAATCGGGAAAGAATACAGAAGGCATTACCTGCTGGTCATCTTGATGCAACCACACTTGCTGATTATCTTGTTAATAAGGGTGTGCCATTTAGAACGTCTCATGATATCGCTGGAAAATCTGTTGCTTTATGTACATTGAAGAACTGCCAACTGCTGGACTTAAGTCTTGATGAGCTGAGAAGTATAAATCCAGTCTTTGAGGAGGATGTGTATGAATTTCTTGGAGTAGAAAATGCGATCAAGAAATTTGTCTCTTATGGCTCCACCGGGTCAGCATGTGTTGCCAGCCAACTTGATTATTGGTTGAAAAAACTTGAAATGAAGTGA 1536 0.4779 MVSSIGTLCSSFITVPPSSSRTPSYCSFPSRRIITPRMGPYPVQAQAQPKPKEAKLWGGRFEEGVTDVVERFTESISFDKQLYKQDIMGSRAHASMLAHQGLISASDSDSILKGLDEIERRIENGEFNWRADREDVHMNIEAALTDMIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDKILVSMKQLQVSLLTLALNNEGLIVPGYTHLQRAQPVLLQHLLLAYVEEIERDAGRLVDCRARMNFCPLGACALAGTGLPIDRFMTSEALGFTAPLRNSIDAVSDRDFVLEFLSANAITAVHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPHAYNRDLQEDKEPVFDSVKTILGMLEVSAEFALKITFNRERIQKALPAGHLDATTLADYLVNKGVPFRTSHDIAGKSVALCTLKNCQLLDLSLDELRSINPVFEEDVYEFLGVENAIKKFVSYGSTGSACVASQLDYWLKKLEMK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01068 511 CDD Argininosuccinate_lyase 75 508 IPR009049 GO:0004056|GO:0042450
Pumo10g01068 511 NCBIfam argininosuccinate lyase 56 503 IPR009049 GO:0004056|GO:0042450
Pumo10g01068 511 FunFam Argininosuccinate lyase 54 159 - -
Pumo10g01068 511 Pfam Argininosuccinate lyase C-terminal 418 483 IPR029419 -
Pumo10g01068 511 FunFam Argininosuccinate lyase chloroplastic 282 439 - -
Pumo10g01068 511 SUPERFAMILY L-aspartase-like 56 508 IPR008948 GO:0003824
Pumo10g01068 511 Gene3D Fumarase/aspartase (Central domain) 172 501 - -
Pumo10g01068 511 Pfam Lyase 59 353 IPR022761 -
Pumo10g01068 511 ProSitePatterns Fumarate lyases signature. 328 337 IPR020557 GO:0003824
Pumo10g01068 511 Gene3D - 413 485 - -
Pumo10g01068 511 PANTHER ARGININOSUCCINATE LYASE 44 510 IPR009049 GO:0004056|GO:0042450
Pumo10g01068 511 FunFam Argininosuccinate lyase 414 485 - -
Pumo10g01068 511 Gene3D - 75 282 IPR024083 -
Pumo10g01068 511 PRINTS Fumarate lyase superfamily signature 155 173 IPR000362 -
Pumo10g01068 511 PRINTS Fumarate lyase superfamily signature 284 311 IPR000362 -
Pumo10g01068 511 PRINTS Fumarate lyase superfamily signature 200 218 IPR000362 -
Pumo10g01068 511 PRINTS Fumarate lyase superfamily signature 328 344 IPR000362 -
Pumo10g01068 511 Hamap Argininosuccinate lyase [argH]. 55 506 IPR009049 GO:0004056|GO:0042450
Pumo10g01068 511 PRINTS Argininosuccinate lyase family signature 246 262 - -
Pumo10g01068 511 PRINTS Argininosuccinate lyase family signature 154 176 - -
Pumo10g01068 511 PRINTS Argininosuccinate lyase family signature 195 215 - -
Pumo10g01068 511 PRINTS Argininosuccinate lyase family signature 328 344 - -
Pumo10g01068 511 PRINTS Argininosuccinate lyase family signature 363 382 - -
Pumo10g01068 511 PRINTS Argininosuccinate lyase family signature 284 308 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01068 K01755 - gmx:100796544 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01068 10 13805343 13809573 Pumo10g01068 10 13805343 13809573 ECH